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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=phemd
_pkgver=1.16.0
pkgname=r-${_pkgname,,}
pkgver=1.16.0
pkgrel=1
pkgdesc='Phenotypic EMD for comparison of single-cell samples'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-cowplot
r-destiny
r-ggplot2
r-igraph
r-maptree
r-monocle
r-phater
r-pheatmap
r-pracma
r-rann
r-rcolorbrewer
r-reticulate
r-rtsne
r-s4vectors
r-scatterplot3d
r-seurat
r-singlecellexperiment
r-summarizedexperiment
r-transport
r-vgam
)
optdepends=(
r-knitr
)
makedepends=(
git
)
source=("git+https://git.bioconductor.org/packages/${_pkgname}")
sha256sums=('SKIP')
build() {
tar -zcvf ${_pkgname}_${_pkgver}.tar.gz ${_pkgname}
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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