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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=pipeComp
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=1
pkgdesc='pipeComp pipeline benchmarking framework'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-aricode
r-biocparallel
r-circlize
r-clue
r-complexheatmap
r-cowplot
r-dplyr
r-ggplot2
r-intrinsicdimension
r-knitr
r-matrixstats
r-randomcolor
r-rcolorbrewer
r-reshape2
r-rtsne
r-s4vectors
r-scales
r-scater
r-scran
r-seurat
r-singlecellexperiment
r-summarizedexperiment
r-uwot
r-viridislite
)
optdepends=(
r-biocstyle
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('b65c23d21c9176ffe34eda1ead51e9edfffa446d029dad0c16af37585c5907f3')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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