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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=PubScore
_pkgver=1.8.0
pkgname=r-${_pkgname,,}
pkgver=1.8.0
pkgrel=4
pkgdesc='Automatic calculation of literature relevance of genes'
arch=('any')
url="https://bioconductor.org/packages/3.15/${_pkgname}"
license=('MIT')
depends=(
r
r-dplyr
r-ggplot2
r-ggrepel
r-igraph
r-intergraph
r-network
r-progress
r-rentrez
r-sna
)
optdepends=(
r-biocmanager
r-biomart
r-fcbf
r-knitr
r-plotly
r-rmarkdown
r-singlecellexperiment
r-summarizedexperiment
r-testthat
)
source=("https://bioconductor.org/packages/3.15/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('0d7908ba4121cea855893e2b5945272c97b889c049c49304a42df76af6fe75a1')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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