PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=pvac
_pkgver=1.50.0
pkgname=r-${_pkgname,,}
pkgver=1.50.0
pkgrel=1
pkgdesc='PCA-based gene filtering for Affymetrix arrays'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('LGPL')
depends=(
  r
  r-affy
  r-biobase
)
optdepends=(
  r-affydata
  r-allmll
  r-genefilter
  r-pbapply
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('ad45217fa2fde5716abdbcd55fde000348b74ed8c76ebf58570f4f911a816a1c')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: