PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=QSutils
_pkgver=1.30.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Quasispecies Diversity"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-only')
depends=(
  r-ape
  r-biocgenerics
  r-biostrings
  r-psych
  r-pwalign
)
optdepends=(
  r-biocstyle
  r-ggplot2
  r-knitr
  r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('b069a61240820dd3ceacb00e7dec817e')
b2sums=('2f2a8cb84952e484ac514183fb13bef75b836aa933810f5abec69a6d3512e7d4c99e7fa78d9e9a2a0036ca4645ea06ac0628032606485b8b08e4531bc98aa498')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}