blob: c882f92cf1e1d8c4fead4a783a937927ae4661c5 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
|
# Contributor: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=Rhtslib
_bcver=1.24.0
pkgname=r-${_bcname,,}
pkgver=${_bcver//[:-]/.}
pkgrel=1
pkgdesc="HTSlib high-throughput sequencing library as an R package"
arch=(i686 x86_64)
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
license=(LGPL2)
depends=(r r-zlibbioc bzip2 xz curl)
makedepends=(make)
optdepends=(r-biocstyle r-knitr)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
sha256sums=('8e66aeaa25f3a1f87ec9fafcc54381664d55c0b7738029a260318982d27e9729')
options=(staticlibs)
build() {
cd "${srcdir}"
R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l ${srcdir}
}
package() {
cd "${srcdir}"
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_bcname}" "${pkgdir}/usr/lib/R/library"
}
|