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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=RIPAT
_pkgver=1.6.0
pkgname=r-${_pkgname,,}
pkgver=1.6.0
pkgrel=1
pkgdesc='Retroviral Integration Pattern Analysis Tool (RIPAT)'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('Artistic2.0')
depends=(
r
r-biomart
r-genomicranges
r-ggplot2
r-iranges
r-karyoploter
r-openxlsx
r-plyr
r-regioner
r-rtracklayer
r-stringr
)
optdepends=(
r-knitr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('262f3a905ee3c1168065aabc6d56d99ba9790b95bbc30974ad42bffd28091277')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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