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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SCATEData
_pkgver=1.10.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=2
pkgdesc="Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement)"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('MIT')
depends=(
r-experimenthub
r-genomicalignments
r-genomicranges
)
optdepends=(
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/3.17/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('dd2241d946202b696c0a706b906425f4')
b2sums=('a3e8aeaa2a5de51ccb7aadd2e840c419138f279b13c1feec7e445036785ddcd25af77cd5b9ec2dfbd77aa9f3e309dbdb6fc9288a763de8682f90bbcd6cf58757')
build() {
mkdir build
R CMD INSTALL -l build "$_pkgname"
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
install -d "$pkgdir/usr/share/licenses/$pkgname"
ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
}
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