PKGBUILD


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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=seqLogo
_pkgver=1.72.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Sequence logos for DNA sequence alignments"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('LGPL-2.0-or-later')
depends=(
  r
)
optdepends=(
  r-biocstyle
  r-knitr
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('a4abef9336767a981efc4395fa831aea')
b2sums=('4016a42214eb97998f14940e0c1778e2791ff090761f3787ad0c6f13ab32971eb96aadbb8b80a8c34b3f79eed2e64bc3f9cc577600be531a7e3e56ee2eb366ee')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}