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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SeqVarTools
_pkgver=1.42.0
pkgname=r-${_pkgname,,}
pkgver=1.42.0
pkgrel=1
pkgdesc='Tools for variant data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biobase
r-biocgenerics
r-data.table
r-gdsfmt
r-genomicranges
r-gwasexacthw
r-iranges
r-logistf
r-s4vectors
r-seqarray
)
optdepends=(
r-biocstyle
r-runit
r-stringr
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('fe5d89902b14e86cdb439502396bc38275dae6319b1e0f5dd8c196548258a3d7')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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