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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=snapcount
_pkgver=1.12.0
pkgname=r-${_pkgname,,}
pkgver=1.12.0
pkgrel=1
pkgdesc='R/Bioconductor Package for interfacing with Snaptron for rapid querying of expression counts'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-assertthat
r-data.table
r-genomicranges
r-httr
r-iranges
r-jsonlite
r-magrittr
r-purrr
r-r6
r-rlang
r-stringr
r-summarizedexperiment
)
optdepends=(
r-biocmanager
r-biocstyle
r-bit64
r-covr
r-devtools
r-knitcitations
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('684e2d3039d3625c9bac91e4bd6309c905172d367d3b8e297212c302f52ece08')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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