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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SpatialDecon
_pkgver=1.14.0
pkgname=r-${_pkgname,,}
pkgver=1.14.0
pkgrel=1
pkgdesc='Deconvolution of mixed cells from spatial and/or bulk gene expression data'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('MIT')
depends=(
r
r-biobase
r-geomxtools
r-lognormreg
r-repmis
r-seuratobject
)
optdepends=(
r-knitr
r-qpdf
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('4df6d68fcf261a17e3b45c456da31c2b3370aca25ca43ebb20a601342e6f895c')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}"
}
# vim:set ts=2 sw=2 et:
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