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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=SPLINTER
_pkgver=1.22.0
pkgname=r-${_pkgname,,}
pkgver=1.22.0
pkgrel=1
pkgdesc='Splice Interpreter of Transcripts'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biomart
r-biostrings
r-bsgenome.mmusculus.ucsc.mm9
r-genomeinfodb
r-genomicalignments
r-genomicfeatures
r-genomicranges
r-ggplot2
r-googlevis
r-gviz
r-iranges
r-plyr
r-s4vectors
r-seqlogo
r-stringr
)
optdepends=(
r-biocstyle
r-knitr
r-rmarkdown
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('fde70ce983950c4d37e99ce420006e96aa1686c1a06a250726b7205567b071cf')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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