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# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
_pkgname=TimiRGeN
_pkgver=1.11.0
pkgname=r-${_pkgname,,}
pkgver=1.11.0
pkgrel=1
pkgdesc='Time sensitive microRNA-mRNA integration, analysis and network generation tool'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
r
r-biomart
r-clusterprofiler
r-dplyr
r-freqprof
r-ggdendro
r-gghighlight
r-ggplot2
r-gplots
r-gtools
r-igraph
r-mfuzz
r-multiassayexperiment
r-rcy3
r-readxl
r-reshape2
r-rwikipathways
r-scales
r-stringr
r-tidyr
)
optdepends=(
r-biocmanager
r-kableextra
r-knitr
r-org.hs.eg.db
r-org.mm.eg.db
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('22bf75a246dcb1dc85830bdeb9300b00647ae91fe5647d37a6d3d5405b1e9280')
build() {
R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}
package() {
install -dm0755 "${pkgdir}/usr/lib/R/library"
cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et:
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