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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
_pkgname=TSAR
_pkgver=1.0.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="Thermal Shift Analysis in R"
arch=(any)
url="https://bioconductor.org/packages/${_pkgname}"
license=(AGPL3)
depends=(
r-dplyr
r-ggplot2
r-ggpubr
r-jsonlite
r-magrittr
r-minpack.lm
r-openxlsx
r-plotly
r-readxl
r-rhandsontable
r-shiny
r-shinyjs
r-shinywidgets
r-stringr
r-tidyr
)
checkdepends=(
r-testthat
)
optdepends=(
r-knitr
r-rmarkdown
r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('7cc8589151c5b03e247590bbd7dc04dd')
sha256sums=('bc75e3ad29377425c1da1b43cef760445d71ea47d8fc0a0390705d3778b9f0cd')
build() {
mkdir -p build
R CMD INSTALL "$_pkgname" -l build
}
check() {
cd "$_pkgname/tests"
R_LIBS="$srcdir/build" NOT_CRAN=true Rscript --vanilla testthat.R
}
package() {
install -d "$pkgdir/usr/lib/R/library"
cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}
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