PKGBUILD


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# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>

_pkgname=tximportData
_pkgver=1.32.0
pkgname=r-${_pkgname,,}
pkgver=${_pkgver//-/.}
pkgrel=1
pkgdesc="provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project"
arch=(any)
url="https://bioconductor.org/packages/$_pkgname"
license=('GPL-2.0-or-later')
depends=(
  r
)
optdepends=(
  r-knitr
  r-markdown
)
source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
md5sums=('af7ba3db49799593171f72e9116dc0b5')
b2sums=('5c6e0b3ffe7c193076bee4426c6db2d8cc4fd829535d78da21d691bd8aaa447113c1d73e77a6e85bee206d33c2e2c7cd198879834e04d6a98a0476533f479f2e')

build() {
  mkdir build
  R CMD INSTALL -l build "$_pkgname"
}

package() {
  install -d "$pkgdir/usr/lib/R/library"
  cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
}