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# Maintainer: Philipp A. <flying-sheep@web.de>
pkgname=scanpy
pkgver=1.4.4
pkgrel=1
pkgdesc='Single-Cell Analysis in Python'
arch=(any)
provides=(scanpy python-scanpy)
url='https://github.com/theislab/scanpy'
license=(BSD)
depends=(
'python-anndata>=0.6.22'
'python-matplotlib>=3.0'
'python-pandas>=0.21'
'python-scipy>=1.3'
python-seaborn
python-h5py
python-pytables
python-tqdm
python-importlib-metadata
'python-scikit-learn>=0.21.2'
'python-statsmodels>=0.10.0'
python-patsy
python-networkx
python-natsort
python-joblib
'python-numba>=0.41.0'
'python-umap-learn>=0.3.0'
)
optdepends=(
'python-bbknn: Batch balanced KNN (batch correction)'
'python-leidenalg: leiden community detection'
'python-multicoretsne: Fast t-SNE'
'python-louvain-igraph: Louvain clustering'
)
makedepends=(install-wheel-scripts)
_wheel="$pkgname-$pkgver-py3-none-any.whl"
source=("https://files.pythonhosted.org/packages/py3/${pkgname::1}/$pkgname/$_wheel")
sha256sums=('f07e743ace7fa2404b4305f377338058af916f5e02d21405529f44c369c1d4fe')
noextract=("$_wheel")
package() {
local site="$pkgdir/usr/lib/$(readlink /bin/python3)/site-packages"
install -d "$site"
unzip "$_wheel" -d "$site"
install-wheel-scripts --prefix="$pkgdir/usr" "$_wheel"
}
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