PKGBUILD


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# Maintainer: Antony Lee <anntzer dot lee at gmail dot com>
pkgname=snapgene-viewer
pkgver=3.2.0
pkgrel=1
pkgdesc='Software for plasmid mapping, primer design, and restriction site analysis'
arch=('x86_64')
url='http://www.snapgene.com/products/snapgene_viewer/'
license=('custom')
makedepends=('rpmextract' 'patchelf')
source=("snapgene_viewer_${pkgver}_linux.rpm::http://www.snapgene.com/products/snapgene_viewer/download.php?&majorRelease=${pkgver:0:3}&minorRelease=${pkgver}&os=linux_rpm")
sha512sums=('2df9c3a883a1dbb3afbcbead0e28adc723b37c6ee08e35e38fe05838bd6cc300f8cb0c05ff0d7a7f6b73a94b8b804366900f9f1c043c855bce4ced99673f59cc')

# Some shared libraries could be stripped out and installed as dependencies
# instead.  However, directly calling the snapgene-viewer binary currently
# segfaults, so some care is needed.

package() {
    cd "$pkgdir"
    rpmextract.sh "$srcdir/snapgene_viewer_${pkgver}_linux.rpm"
    patchelf --remove-rpath "$pkgdir/opt/gslbiotech/snapgene-viewer/snapgene-viewer"
    patchelf --remove-rpath "$pkgdir/opt/gslbiotech/snapgene-viewer/libqntp.so.1"
    patchelf --remove-rpath "$pkgdir/opt/gslbiotech/snapgene-viewer/crypto/libqca-ossl.so"
    mkdir "$pkgdir/usr/bin"
    cat <<'EOF' >"$pkgdir/usr/bin/snapgene-viewer"
#!/bin/sh
# Snapgene Viewer is not localized and genbank exports are invalid in other
# locales, so we just set LANG=C.
LANG=C /opt/gslbiotech/snapgene-viewer/snapgene-viewer.sh
EOF
    chmod a+x "$pkgdir/usr/bin/snapgene-viewer"

    mkdir -p "$pkgdir/usr/share/licenses/$pkgname"
    ln -s "/opt/gslbiotech/snapgene-viewer/resources/licenseAgreement.html" "$pkgdir/usr/share/licenses/$pkgname/LICENSE.html"
}