blob: c945ac9e482874fd1b10f60546a5923666aa4b9f (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
|
# Maintainer: Hu Butui <hot123tea123@gmail.com>
# Contributor: Jens Staal <staal1978@gmail.com>
_pkgname=ugene
pkgname=('ugene' 'ugene-cuda')
pkgver=41.0
pkgrel=1
pkgdesc='A free open-source cross-platform bioinformatics software'
arch=('x86_64')
url='http://ugene.net'
license=('GPL2')
depends=(
glu
hicolor-icon-theme
libxtst
qt5-script
qt5-svg
)
makedepends=(
cuda
qt5-tools
opencl-headers
)
source=("${_pkgname}-${pkgver}.tar.gz::https://github.com/ugeneunipro/ugene/archive/refs/tags/${pkgver}.tar.gz"
"ugene.desktop"
)
sha256sums=('eab798354f71d8b21e4dff94e76abc48ca0e59e3d5234bf25d269960ef4be0b9'
'5914bc5938dc29f58aeca16233b0bb7dc5271131a3260ed749f9dc009ff3bc03')
prepare() {
cp -a ${_pkgname}-${pkgver} ${_pkgname}-cuda-${pkgver}
}
build() {
cd "${_pkgname}-${pkgver}"
qmake CONFIG+=x64 \
UGENE_CUDA_DETECTED=0 \
UGENE_OPENCL_DETECTED=1 \
UGENE_USE_BUNDLED_ZLIB=0 \
UGENE_USE_BUNDLED_SQLITE=0
make
cd "${srcdir}/${_pkgname}-cuda-${pkgver}"
CUDA_LIB_PATH=/opt/cuda/lib64 \
CUDA_INC_PATH=/opt/cuda/include \
qmake CONFIG+=x64 \
UGENE_CUDA_DETECTED=1 \
UGENE_OPENCL_DETECTED=1 \
UGENE_USE_BUNDLED_ZLIB=0 \
UGENE_USE_BUNDLED_SQLITE=0
CUDA_LIB_PATH=/opt/cuda/lib64 \
CUDA_INC_PATH=/opt/cuda/include \
make
}
package_ugene() {
cd "${pkgname}-${pkgver}"
make INSTALL_ROOT=${pkgdir} install
install -d "${pkgdir}/usr/share/applications"
install -Dm644 "${srcdir}/${_pkgname}.desktop" "${pkgdir}/usr/share/applications/${_pkgname}.desktop"
}
package_ugene-cuda() {
pkgdesc="${pkgdesc} (with CUDA)"
provides=(ugene=${pkgver})
conflicts=(ugene)
depends+=(
cuda
)
cd "${pkgname}-${pkgver}"
make INSTALL_ROOT=${pkgdir} install
install -d "${pkgdir}/usr/share/applications"
install -Dm644 "${srcdir}/${_pkgname}.desktop" "${pkgdir}/usr/share/applications/${_pkgname}.desktop"
}
# vim:set ts=2 sw=2 et:
|