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3dmod
3dmodv
addtostack
adocxmlconv
alignframes
alignlog
alterheader
archiveorig
assemblevol
autofidseed
autopatchfit
avganova
avgstack
avgstatplot
b3dcatfiles
b3dcopy
b3dhostname
b3dremove
b3dtouch
b3dwinps
batchruntomo
beadtrack
binvol
blendmont
boxavg
boxstartend
calc
ccderaser
checkmtmod
checkxforms
chunksetup
clip
clipmodel
clonemodel
clonevolume
collectmmm
colornewst
combinefft
contourmod
convertmod
copyheader
copytomocoms
corrsearch3d
cryoposition
ctfphaseflip
ctfplotter
densmatch
densnorm
dm2mrc
dm3props
dualvolmatch
echo2
edgeeraser
edgemtf
edgepatches
edmont
edpiecepoint
endmodel
enhance
eraser
etomo
etomo.jar
etomoPluginDemo
excise
excludeviews
expandargs
extposition
extractmagrad
extractpieces
extracttilts
extstack
fenestra
fftrans
fiberpitch
filltomo
filterplot
findbeads3d
findcontrast
finddistort
findgradient
findhotpixels
findsection
findsirtdiffs
findwarp
finishjoin
fitpatches
fixboundaries
fixmont
flattenwarp
framewatcher
genhstplt
goodframe
gpumonitor
gputilttest
header
howflared
idfprocess
imavgstat
imod
imod2meta
imod2obj
imod2patch
imod2rib
imod2vrml
imod2vrml2
imodauto
imodchopconts
imodcpuload
imodcurvature
imod-dist
imodexplode
imodextract
imodfillin
imodfindbeads
imodhelp
imodinfo
imodjoin
imodkillgroup
imodmesh
imodmop
imodpsview
imodqtassist
imodsendevent
imodsetvalues
imodsortsurf
imodtrans
imoduntar
imodv
joinmodel
joinwarp2model
makecomfile
makegradtable
makejoincom
makepyramid
MarkersCorrespond
matchorwarp
matchrotpairs
matchshifts
matchvol
maxjoinsize
midas
model2point
montagesize
mrc2tif
mrcbyte
mrctaper
mrcx
mtdetect
mtffilter
mtk
mtlengths
mtmodel
mtoverlap
mtpairing
mtrotlong
mtsmooth
mtteach
nad_eed_3d
nda
newstack
numericdiff
onegenplot
onepatchcorr
patch2imod
patchcorr3d
patchcrawl3d
pickbestseed
point2model
preNAD
preNID
processchunks
prochunks.csh
queuechunk
RAPTOR
raw2mrc
rawtiltcoords
realscalemod
rec2imod
recombine
reducecont
reducemont
reducemtmod
refinematch
remapmodel
repackseed
resamplemod
restrictalign
rotatevol
rotmont
runimodqtapp
runraptor
sampletilt
scalemodel
sda
selfalign
setlibpath
settmpdir
setupcombine
setupcoms
setuplong
setupstitch
sirtsetup
slashfindspheres
slashmasksort
slurmCleanup.sh
slurmInit.sh
smoothsurf
solvematch
sortbeadsurfs
splitblend
splitcombine
splitcorrection
splitmrc
splittilt
squeezevol
startprocess
stitchalign
subimage
subimanova
subimstat
subm
submfg
subtomosetup
subtractcurves
sumdensity
taperoutvol
tapervoledge
tif2mrc
tilt
tiltalign
tiltxcorr
tomodataplots
tomopieces
tomopitch
tomosnapshot
tomostitch
transferfid
trimvol
vmstocsh
vmstopy
warpvol
wmod2imod
xcorrstack
xf2rotmagstr
xfalign
xfforfidless
xfinterstack
xfinverse
xfjointomo
xfmodel
xfproduct
xfsimplex
xftoxg
xyzproj
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