summarylogtreecommitdiffstats
path: root/coot.in
blob: 1be2adf79aafe80b01cd88c07c721e5e9246ce61 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
#!/bin/sh
# -*-shell-script-*-
# coot wrapper script
# Copyright 2004, 2005, 2006, 2007 University of York
# written by Paul Emsley

COOT_PREFIX="/usr"
current_exe_dir="/usr/libexec"

coot_real=$current_exe_dir/coot-bin
# echo coot-real is at $coot_real

# ----------------------------------------------------------------------------
# ----------------------------------------------------------------------------
# If the COOT_PREFIX is correct, then these should not need modification
# i.e.  nothing below here need be changed.
# ----------------------------------------------------------------------------
# ----------------------------------------------------------------------------
#
prefix=$COOT_PREFIX

SYMINFO=$COOT_PREFIX/share/coot/syminfo.lib
COOT_SCHEME_DIR=$COOT_PREFIX/share/coot/scheme
COOT_STANDARD_RESIDUES=$COOT_PREFIX/share/coot/standard-residues.pdb
COOT_PIXMAPS_DIR=$COOT_PREFIX/share/coot/pixmaps
COOT_DATA_DIR=$COOT_PREFIX/share/coot
COOT_RESOURCES_FILE=$COOT_PREFIX/share/coot/cootrc
COOT_REF_STRUCTS=$COOT_PREFIX/share/coot/reference-structures
COOT_PYTHON_DIR=
COOT_REFMAC_LIB_DIR=
LC_ALL=C

PYTHONPATH=${PYTHONPATH:+"${PYTHONPATH}:"}$COOT_PYTHON_DIR

GUILE_WARN_DEPRECATED=no

if [ -n "$LOCAL_GUILE_LOAD_PATH_EXTRAS" ] ; then
    GUILE_LOAD_PATH=${LOCAL_GUILE_LOAD_PATH_EXTRAS}:$GUILE_LOAD_PATH
    export GUILE_LOAD_PATH
fi

# echo GUILE_LOAD_PATH is now $GUILE_LOAD_PATH

export SYMINFO
export COOT_PREFIX
export COOT_STANDARD_RESIDUES
export COOT_REFMAC_LIB_DIR
export COOT_PYTHON_DIR
export PYTHONPATH
export COOT_SCHEME_DIR
export COOT_REF_STRUCTS
export COOT_RESOURCES_FILE
export COOT_PIXMAPS_DIR
export COOT_DATA_DIR

export LC_ALL

echo $coot_real $*
$coot_real $*
status=$?

if [ $status != 0 ] ; then
    /usr/bin/guile1.8 -s $COOT_PREFIX/share/coot/scheme/coot-crash-catcher.scm $coot_real
fi