16 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer
wimlib 1.10.0-1 58 3.19 A library and program to extract, create, and modify WIM files Synchronicity
velvet 1.2.10-2 3 0.03 Sequence assembler for very short reads Synchronicity
soapdenovo 1.05-1 4 0.08 A novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes. Synchronicity
quake-bio 0.3.1-2 0 0.00 A package to correct Illumina DNA sequencing reads Synchronicity
pirs 1.10-1 0 0.00 A program for simulating Illumina paired-end DNA reads from a genome Synchronicity
ntfs-3g-system-compression-git 0.2.r3.e912afe-1 1 0.33 NTFS-3G plugin for reading "system compressed" files Synchronicity
mummer 3.23-2 6 0.76 MUMmer is a program for rapidly aligning large genomes Synchronicity
libdivsufsort 2.0.1-2 0 0.00 A lightweight suffix-sorting library Synchronicity
jellyfish 2.2.6-1 3 0.06 A tool for fast, memory-efficient counting of k-mers in DNA Synchronicity
flash-bio 1.2.11-1 1 0.20 An accurate and fast tool to merge paired-end DNA reads Synchronicity
dwgsim 0.1.10-3 0 0.00 Software for simulating reads from whole genomes Synchronicity
dnaa 0.1.2-3 0 0.00 An analysis package for short reads from next-generation sequencing Synchronicity
blat 35-1 2 0.00 The BLAST-like Alignment Tool: fast sequence search command line tool Synchronicity
bfast 0.7.0a-2 1 0.00 Blat-like Fast Accurate Search Tool; facilitates the fast and accurate mapping of short reads to reference sequences Synchronicity
amos 3.1.0-3 2 0.00 A modular, open source whole-genome assembler Synchronicity
abyss 1.9.0-1 1 0.04 Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler Synchronicity

16 packages found. Page 1 of 1.