91296 packages found. Page 1132 of 1826.

« First ‹ Previous 1 .. 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 .. 1826 Next › Last »

Name Version Votes Popularity? Description Maintainer Last Updated
exabayes 1.5.1-2 1 0.00 software package for Bayesian tree inference https://doi.org/10.1093/molbev/msu236 malacology 2022-08-30 12:02 (UTC)
examl 3.0.22-3 1 0.00 Exascale Maximum Likelihood https://doi.org/10.1093/bioinformatics/btv184 malacology 2022-08-29 03:55 (UTC)
examl-mpi 3.0.22-3 1 0.00 Exascale Maximum Likelihood https://doi.org/10.1093/bioinformatics/btv184 malacology 2022-08-29 03:55 (UTC)
exonerate 2.4.0-2 3 0.00 A general purpose tool for biological sequence comparison malacology 2024-02-13 04:43 (UTC)
fastdnaml 1.2.2-0 0 0.00 A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood https://doi.org/10.1093/bioinformatics/10.1.41 malacology 2024-02-05 02:14 (UTC)
fastme 2.1.6.3-1 0 0.00 a comprehensive, accurate and fast distance-based phylogeny inference program https://doi.org/10.1093/molbev/msv150 malacology 2023-10-11 09:46 (UTC)
fastp 0.23.4-3 0 0.00 a tool designed to provide fast all-in-one preprocessing for FastQ files, developed in C++ with multithreading supported to afford high performance malacology 2023-07-09 10:10 (UTC)
fastqc 0.12.1-4 5 0.00 A quality control tool for high throughput sequence data. malacology 2023-06-23 18:01 (UTC)
fastuniq 1.1-1 0 0.00 ultrafast de novo tool for removal of duplicates in paired short DNA sequence reads in FASTQ format https://doi.org/10.1371/journal.pone.0052249 malacology 2024-02-14 18:01 (UTC)
fermi-lite 0.1.r13.g85f159e-2 1 0.01 Standalone C library for assembling Illumina short reads in small regions malacology 2023-03-22 05:31 (UTC)
figtree 1.4.4-10 0 0.00 Graphical viewer of phylogenetic trees malacology 2023-04-04 19:02 (UTC)
free-delta 3.3.0-1 0 0.00 An Open Source System for Processing Taxonomic Descriptions malacology 2023-12-30 16:16 (UTC)
freec 11.6-2 0 0.00 Copy number and genotype annotation in whole genome and whole exome sequencing data malacology 2022-04-17 18:01 (UTC)
garli 2.1-4 0 0.00 Phylogenetic analysis of molecular sequence data using the maximum-likelihood criterion malacology 2024-02-22 17:38 (UTC)
garlic 1.6-13 3 0.00 Molecular visualization program malacology 2023-04-04 19:03 (UTC)
garlic-doc 1.6-13 3 0.00 Documentation for garlic malacology 2023-04-04 19:03 (UTC)
gatk 4.5.0.0-1 1 0.00 Genome Analysis Toolkit https://doi.org/10.1101/gr.107524.110 malacology 2023-12-14 00:08 (UTC)
gblocks 0.91b-7 1 0.00 A program written in ANSI C language that eliminates poorly aligned positions and divergent regions of an alignment of DNA or protein sequences. https://doi.org/10.1093/oxfordjournals.molbev.a026334 malacology 2024-01-18 12:01 (UTC)
genbankexplorer 1.9-6 1 0.00 Taxonomy-aware DNA sequence processing toolkit malacology 2022-12-04 01:53 (UTC)
generax 2.1.3-1 0 0.00 A Tool for Species-Tree-Aware Maximum Likelihood-Based Gene Family Tree Inference under Gene Duplication, Transfer, and Loss https://doi.org/10.1093/molbev/msaa141 malacology 2024-01-16 20:30 (UTC)
gffcompare 0.12.6-2 1 0.00 classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF malacology 2022-04-17 21:51 (UTC)
gffread 0.12.7-2 1 0.00 GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more malacology 2022-04-17 21:51 (UTC)
hybpiper 2.1.6-1 0 0.00 Recovering genes from targeted sequence capture data https://doi.org/10.3732/apps.1600016 malacology 2024-02-13 09:49 (UTC)
iqtree 2.3.1-1 2 0.00 Efficient phylogenomic software by maximum likelihood https://doi.org/10.1093/molbev/msaa015 malacology 2024-03-26 06:07 (UTC)
iqtree-mpi 2.3.1-1 0 0.00 Efficient phylogenomic software by maximum likelihood; multicore version (OMP). https://doi.org/10.1093/molbev/msaa015 malacology 2024-03-26 06:04 (UTC)
jane 4.01-5 0 0.00 software tool for the cophylogeny reconstruction problem. https://doi.org/10.1186/1748-7188-5-16 malacology 2022-12-01 12:01 (UTC)
jml 1.3.1-2 0 0.00 Testing hybridization using species trees https://doi.org/10.1111/j.1755-0998.2011.03065.x malacology 2022-08-28 10:37 (UTC)
jmodeltest 2.1.10r20160303-7 1 0.00 Phylogenetic Model Averaging, more models, new heuristics and high-performance computing. https://doi.org/10.1093/molbev/msn083 malacology 2022-08-29 21:04 (UTC)
last 1542-1 0 0.00 Genomic aligner for short reads https://doi.org/10.1093/nar/gkq010 malacology 2024-02-19 06:01 (UTC)
legacybasic 1.0.2-1 0 0.00 BASIC interpreter for 1970s/80s BASIC games malacology 2023-10-20 10:26 (UTC)
libmaus 2.0.812_release_20220919125234-3 1 0.00 Bioinformatics data structures and algorithms in C++ malacology 2022-10-19 16:35 (UTC)
lilac-git r1093.f627128-1 0 0.00 The build bot for archlinuxcn malacology 2023-06-05 04:54 (UTC)
lvb 4.2-0 0 0.00 parsimony and simulated annealing in the search for phylogenetic trees https://doi.org/10.1093/bioinformatics/btg402 malacology 2023-07-29 12:26 (UTC)
mafft-desktop 1.0-1 1 0.00 Desktop File For MAFFT malacology 2021-05-06 08:31 (UTC)
mcscanx 2022.11.01-1 0 0.00 Multiple Collinearity Scan toolkit X version https://doi.org/10.1093/nar/gkr1293 malacology 2023-02-09 11:42 (UTC)
mega 11.0.13-3 1 0.00 Molecular Evolutionary Genetics Analysis. https://doi.org/10.1093/molbev/msy096 malacology 2023-04-04 19:30 (UTC)
megax-bin 10.2.6-1 2 0.57 Molecular Evolutionary Genetics Analysis malacology 2021-06-12 01:37 (UTC)
mesquite 3.81_build955-1 0 0.00 A modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms malacology 2023-05-15 16:23 (UTC)
mesquite-doc 3.81_build955-1 0 0.00 doc for mesquite malacology 2023-05-15 16:23 (UTC)
mesquite-extra 3.81_build955-1 0 0.00 extra data for mesquite malacology 2023-05-15 16:23 (UTC)
microtex-git 2022.12.23-1 2 0.00 A dynamic, cross-platform, and embeddable LaTeX rendering library malacology 2023-03-25 06:49 (UTC)
modeltest-gui 0.1.7-8 0 0.00 A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 malacology 2022-08-28 22:03 (UTC)
modeltest-ng 0.1.7-6 0 0.00 A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 malacology 2023-03-25 22:23 (UTC)
modeltest-ng-mpi 0.1.7-7 0 0.00 A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models. https://doi.org/10.1093/molbev/msz189 malacology 2022-08-28 22:03 (UTC)
morphoj 1.08.01-2 1 0.00 integrated program package for doing geometric morphometrics https://doi.org/10.1111/j.1755-0998.2010.02924.x malacology 2023-10-26 06:07 (UTC)
mpboot 1.2-1 0 0.00 Fast phylogenetic maximum parsimony tree inference and bootstrap approximation https://doi.org/10.1186/s12862-018-1131-3 malacology 2023-02-14 12:03 (UTC)
mpi-bucky 1.4.4-2 0 0.00 Bayesian Untangling of Concordance Knots https://doi.org/10.1093/bioinformatics/btq539 malacology 2022-08-29 18:58 (UTC)
mptp 0.2.5-1 0 0.00 A tool for single-locus species delimitation https://doi.org/10.1093/bioinformatics/btx025 malacology 2023-09-13 00:01 (UTC)
mrbayes-beagle 3.2.7-6 0 0.00 A program for the Bayesian estimation of phylogeny. https://doi.org/10.1093/sysbio/sys029 malacology 2022-04-23 18:37 (UTC)
mrbayes-desktop 1.0-1 1 0.00 Desktop File For MrBayes malacology 2021-05-06 08:28 (UTC)

91296 packages found. Page 1132 of 1826.

« First ‹ Previous 1 .. 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 .. 1826 Next › Last »