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r-phenotest
|
1.50.0-1 |
0 |
0.00
|
Tools to test association between gene expression and phenotype in a way that is efficient, structured, fast and scalable. We also provide tools to do GSEA (Gene set enrichment analysis) and copy number variation. |
BioArchLinuxBot
|
2023-10-26 06:45 (UTC) |
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r-pi
|
2.14.0-2 |
0 |
0.00
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Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level |
BioArchLinuxBot
|
2024-04-15 18:30 (UTC) |
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r-ppcseq
|
1.10.0-5 |
0 |
0.00
|
Probabilistic Outlier Identification for RNA Sequencing Generalized Linear Models |
BioArchLinuxBot
|
2024-02-08 12:42 (UTC) |
|
r-pqsfinder
|
2.18.0-1 |
0 |
0.00
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Identification of potential quadruplex forming sequences |
BioArchLinuxBot
|
2023-10-26 02:48 (UTC) |
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r-promise
|
1.54.0-1 |
0 |
0.00
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PRojection Onto the Most Interesting Statistical Evidence |
BioArchLinuxBot
|
2023-10-26 05:47 (UTC) |
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r-prostar
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1.34.6-1 |
0 |
0.00
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Provides a GUI for DAPAR |
BioArchLinuxBot
|
2024-02-17 00:16 (UTC) |
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r-psmatch
|
1.6.0-1 |
0 |
0.00
|
Handling and Managing Peptide Spectrum Matches |
pekkarr
|
2023-12-11 17:31 (UTC) |
|
r-pviz
|
1.36.0-1 |
0 |
0.00
|
Peptide Annotation and Data Visualization using Gviz |
BioArchLinuxBot
|
2023-10-27 15:11 (UTC) |
|
r-pwrewas
|
1.14.0-2 |
0 |
0.00
|
A user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS) |
BioArchLinuxBot
|
2024-02-13 18:12 (UTC) |
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r-quartpac
|
1.34.0-1 |
0 |
0.00
|
Identification of mutational clusters in protein quaternary structures. |
BioArchLinuxBot
|
2023-10-26 04:25 (UTC) |
|
r-ramwas
|
1.26.0-1 |
0 |
0.00
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Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms |
BioArchLinuxBot
|
2023-10-27 07:40 (UTC) |
|
r-rankprod
|
3.28.0-1 |
0 |
0.00
|
Rank Product method for identifying differentially expressed genes with application in meta-analysis |
BioArchLinuxBot
|
2023-10-25 19:50 (UTC) |
|
r-rcistarget
|
1.20.0-2 |
0 |
0.00
|
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions |
BioArchLinuxBot
|
2024-02-14 18:04 (UTC) |
|
r-rcsdp
|
0.1.57.5-3 |
0 |
0.00
|
R Interface to the CSDP Semidefinite Programming Library |
BioArchLinuxBot
|
2024-03-07 18:01 (UTC) |
|
r-receptloss
|
1.14.0-1 |
0 |
0.00
|
Unsupervised Identification of Genes with Expression Loss in Subsets of Tumors |
BioArchLinuxBot
|
2023-10-27 06:48 (UTC) |
|
r-redisparam
|
1.4.0-1 |
0 |
0.00
|
Provide a 'redis' back-end for BiocParallel |
pekkarr
|
2023-12-04 15:23 (UTC) |
|
r-reqon
|
1.48.0-1 |
0 |
0.00
|
Recalibrating Quality Of Nucleotides |
BioArchLinuxBot
|
2023-10-26 03:43 (UTC) |
|
r-rgraphviz
|
2.46.0-2 |
0 |
0.00
|
Provides plotting capabilities for R graph objects |
BioArchLinuxBot
|
2024-04-23 18:02 (UTC) |
|
r-rinside
|
0.2.18-1 |
2 |
0.00
|
C++ Classes to Embed R in C++ (and C) Applications |
BioArchLinuxBot
|
2023-02-01 18:02 (UTC) |
|
r-rjmcmcnucleosomes
|
1.26.0-1 |
0 |
0.00
|
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) |
BioArchLinuxBot
|
2023-10-27 11:44 (UTC) |
|
r-rmio
|
0.4.0-6 |
0 |
0.00
|
Provides 'mio' C++11 Header Files |
BioArchLinuxBot
|
2022-11-26 12:43 (UTC) |
|
r-roar
|
1.38.0-1 |
0 |
0.00
|
Identify differential APA usage from RNA-seq alignments |
BioArchLinuxBot
|
2023-10-27 09:10 (UTC) |
|
r-rogue
|
2.1.6-2 |
0 |
0.00
|
Identify Rogue Taxa in Sets of Phylogenetic Trees |
malacology
|
2024-02-23 00:05 (UTC) |
|
r-rsnps
|
0.6.0-4 |
0 |
0.00
|
Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web |
BioArchLinuxBot
|
2023-10-27 03:36 (UTC) |
|
r-rtrm
|
1.40.0-1 |
0 |
0.00
|
Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks |
BioArchLinuxBot
|
2023-10-26 04:17 (UTC) |
|
r-saigegds
|
2.2.1-3 |
0 |
0.00
|
Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies |
BioArchLinuxBot
|
2024-02-08 12:20 (UTC) |
|
r-samspectral
|
1.56.0-2 |
0 |
0.00
|
Identifies cell population in flow cytometry data |
BioArchLinuxBot
|
2023-12-29 18:01 (UTC) |
|
r-scdd
|
1.26.0-1 |
0 |
0.00
|
Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions |
BioArchLinuxBot
|
2023-10-30 18:49 (UTC) |
|
r-scgps
|
1.16.0-3 |
0 |
0.00
|
A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation) |
BioArchLinuxBot
|
2024-02-08 12:04 (UTC) |
|
r-scider
|
1.0.0-1 |
0 |
0.00
|
Spatial cell-type inter-correlation by density in R |
pekkarr
|
2023-11-28 19:18 (UTC) |
|
r-scmageck
|
1.9.1-4 |
0 |
0.00
|
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
|
r-scshapes
|
1.8.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2023-10-25 22:16 (UTC) |
|
r-segmentseq
|
2.36.0-1 |
0 |
0.00
|
Methods for identifying small RNA loci from high-throughput sequencing data |
BioArchLinuxBot
|
2023-10-27 09:40 (UTC) |
|
r-seqarchr
|
1.6.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2023-11-14 11:31 (UTC) |
|
r-seqpattern
|
1.34.0-1 |
0 |
0.00
|
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2023-10-26 02:54 (UTC) |
|
r-seqtools
|
1.36.0-2 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-04-08 18:03 (UTC) |
|
r-shinyfiles
|
0.9.3-1 |
0 |
0.00
|
A Server-Side File System Viewer for Shiny |
BioArchLinuxBot
|
2022-08-20 05:31 (UTC) |
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r-slider
|
0.3.1-1 |
0 |
0.00
|
Sliding Window Functions |
BioArchLinuxBot
|
2023-10-12 18:03 (UTC) |
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r-sombrero
|
1.4.2-1 |
0 |
0.00
|
SOM Bound to Realize Euclidean and Relational Outputs |
BioArchLinuxBot
|
2024-01-26 00:06 (UTC) |
|
r-spacepac
|
1.40.0-1 |
0 |
0.00
|
Identification of Mutational Clusters in 3D Protein Space via Simulation. |
BioArchLinuxBot
|
2023-10-26 03:36 (UTC) |
|
r-spatzie
|
1.8.0-1 |
0 |
0.00
|
Identification of enriched motif pairs from chromatin interaction data |
BioArchLinuxBot
|
2023-10-28 14:04 (UTC) |
|
r-specl
|
1.36.0-1 |
0 |
0.00
|
specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics |
BioArchLinuxBot
|
2023-10-25 20:39 (UTC) |
|
r-spia
|
2.54.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2023-10-26 01:50 (UTC) |
|
r-spidermir
|
1.32.0-1 |
0 |
0.00
|
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data |
BioArchLinuxBot
|
2023-10-26 05:01 (UTC) |
|
r-splots
|
1.68.0-4 |
0 |
0.00
|
Visualization of high-throughput assays in microtitre plate or slide format |
BioArchLinuxBot
|
2024-04-07 12:04 (UTC) |
|
r-sscore
|
1.72.0-2 |
0 |
0.00
|
S-Score Algorithm for Affymetrix Oligonucleotide Microarrays |
BioArchLinuxBot
|
2024-02-15 18:02 (UTC) |
|
r-statial
|
1.4.5-1 |
0 |
0.00
|
A package to identify changes in cell state relative to spatial associations |
pekkarr
|
2023-12-06 12:20 (UTC) |
|
r-survtype
|
1.18.0-1 |
0 |
0.00
|
Subtype Identification with Survival Data |
BioArchLinuxBot
|
2023-10-27 06:31 (UTC) |
|
r-svmdo
|
1.2.8-1 |
0 |
0.00
|
Identification of Tumor-Discriminating mRNA Signatures via Support Vector Machines Supported by Disease Ontology |
pekkarr
|
2024-01-10 06:07 (UTC) |
|
r-synapter
|
2.26.0-1 |
0 |
0.00
|
Label-free data analysis pipeline for optimal identification and quantitation |
BioArchLinuxBot
|
2023-10-26 07:47 (UTC) |