r-rankprod
|
3.28.0-1 |
0 |
0.00
|
Rank Product method for identifying differentially expressed genes with application in meta-analysis |
BioArchLinuxBot
|
2023-10-25 19:50 (UTC) |
r-rcistarget
|
1.20.0-2 |
0 |
0.00
|
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions |
BioArchLinuxBot
|
2024-02-14 18:04 (UTC) |
r-rcsdp
|
0.1.57.5-3 |
0 |
0.00
|
R Interface to the CSDP Semidefinite Programming Library |
BioArchLinuxBot
|
2024-03-07 18:01 (UTC) |
r-receptloss
|
1.14.0-1 |
0 |
0.00
|
Unsupervised Identification of Genes with Expression Loss in Subsets of Tumors |
BioArchLinuxBot
|
2023-10-27 06:48 (UTC) |
r-redisparam
|
1.4.0-3 |
0 |
0.00
|
Provide a 'redis' back-end for BiocParallel |
pekkarr
|
2024-04-25 11:31 (UTC) |
r-reqon
|
1.48.0-1 |
0 |
0.00
|
Recalibrating Quality Of Nucleotides |
BioArchLinuxBot
|
2023-10-26 03:43 (UTC) |
r-rgraphviz
|
2.46.0-2 |
0 |
0.00
|
Provides plotting capabilities for R graph objects |
BioArchLinuxBot
|
2024-04-23 18:02 (UTC) |
r-rinside
|
0.2.18-1 |
2 |
0.00
|
C++ Classes to Embed R in C++ (and C) Applications |
BioArchLinuxBot
|
2023-02-01 18:02 (UTC) |
r-rjmcmcnucleosomes
|
1.26.0-1 |
0 |
0.00
|
Bayesian hierarchical model for genome-wide nucleosome positioning with high-throughput short-read data (MNase-Seq) |
BioArchLinuxBot
|
2023-10-27 11:44 (UTC) |
r-rmio
|
0.4.0-6 |
0 |
0.00
|
Provides 'mio' C++11 Header Files |
BioArchLinuxBot
|
2022-11-26 12:43 (UTC) |
r-roar
|
1.38.0-1 |
0 |
0.00
|
Identify differential APA usage from RNA-seq alignments |
BioArchLinuxBot
|
2023-10-27 09:10 (UTC) |
r-rogue
|
2.1.6-2 |
0 |
0.00
|
Identify Rogue Taxa in Sets of Phylogenetic Trees |
malacology
|
2024-02-23 00:05 (UTC) |
r-rsnps
|
0.6.0-4 |
0 |
0.00
|
Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web |
BioArchLinuxBot
|
2023-10-27 03:36 (UTC) |
r-rtrm
|
1.40.0-1 |
0 |
0.00
|
Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks |
BioArchLinuxBot
|
2023-10-26 04:17 (UTC) |
r-saigegds
|
2.2.1-3 |
0 |
0.00
|
Scalable Implementation of Generalized mixed models using GDS files in Phenome-Wide Association Studies |
BioArchLinuxBot
|
2024-02-08 12:20 (UTC) |
r-samspectral
|
1.56.0-3 |
0 |
0.00
|
Identifies cell population in flow cytometry data |
BioArchLinuxBot
|
2024-04-24 22:07 (UTC) |
r-scdd
|
1.26.0-1 |
0 |
0.00
|
Mixture modeling of single-cell RNA-seq data to identify genes with differential distributions |
BioArchLinuxBot
|
2023-10-30 18:49 (UTC) |
r-scgps
|
1.16.0-3 |
0 |
0.00
|
A complete analysis of single cell subpopulations, from identifying subpopulations to analysing their relationship (scGPS = single cell Global Predictions of Subpopulation) |
BioArchLinuxBot
|
2024-02-08 12:04 (UTC) |
r-scider
|
1.0.0-1 |
0 |
0.00
|
Spatial cell-type inter-correlation by density in R |
pekkarr
|
2023-11-28 19:18 (UTC) |
r-scmageck
|
1.9.1-4 |
0 |
0.00
|
Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data |
BioArchLinuxBot
|
2023-04-29 05:01 (UTC) |
r-scshapes
|
1.8.0-1 |
0 |
0.00
|
A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data |
BioArchLinuxBot
|
2023-10-25 22:16 (UTC) |
r-segmentseq
|
2.36.0-1 |
0 |
0.00
|
Methods for identifying small RNA loci from high-throughput sequencing data |
BioArchLinuxBot
|
2023-10-27 09:40 (UTC) |
r-seqarchr
|
1.6.0-1 |
0 |
0.00
|
Identify Different Architectures of Sequence Elements |
pekkarr
|
2023-11-14 11:31 (UTC) |
r-seqpattern
|
1.34.0-1 |
0 |
0.00
|
Visualising oligonucleotide patterns and motif occurrences across a set of sorted sequences |
BioArchLinuxBot
|
2023-10-26 02:54 (UTC) |
r-seqtools
|
1.36.0-2 |
0 |
0.00
|
Analysis of nucleotide, sequence and quality content on fastq files |
BioArchLinuxBot
|
2024-04-08 18:03 (UTC) |
r-shinyfiles
|
0.9.3-1 |
0 |
0.00
|
A Server-Side File System Viewer for Shiny |
BioArchLinuxBot
|
2022-08-20 05:31 (UTC) |
r-slider
|
0.3.1-1 |
0 |
0.00
|
Sliding Window Functions |
BioArchLinuxBot
|
2023-10-12 18:03 (UTC) |
r-sombrero
|
1.4.2-1 |
0 |
0.00
|
SOM Bound to Realize Euclidean and Relational Outputs |
BioArchLinuxBot
|
2024-01-26 00:06 (UTC) |
r-spacepac
|
1.40.0-1 |
0 |
0.00
|
Identification of Mutational Clusters in 3D Protein Space via Simulation. |
BioArchLinuxBot
|
2023-10-26 03:36 (UTC) |
r-spatzie
|
1.8.0-1 |
0 |
0.00
|
Identification of enriched motif pairs from chromatin interaction data |
BioArchLinuxBot
|
2023-10-28 14:04 (UTC) |
r-specl
|
1.36.0-1 |
0 |
0.00
|
specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics |
BioArchLinuxBot
|
2023-10-25 20:39 (UTC) |
r-spia
|
2.54.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2023-10-26 01:50 (UTC) |
r-spidermir
|
1.32.0-1 |
0 |
0.00
|
SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data |
BioArchLinuxBot
|
2023-10-26 05:01 (UTC) |
r-splots
|
1.68.0-4 |
0 |
0.00
|
Visualization of high-throughput assays in microtitre plate or slide format |
BioArchLinuxBot
|
2024-04-07 12:04 (UTC) |
r-sscore
|
1.72.0-2 |
0 |
0.00
|
S-Score Algorithm for Affymetrix Oligonucleotide Microarrays |
BioArchLinuxBot
|
2024-02-15 18:02 (UTC) |
r-statial
|
1.4.5-1 |
0 |
0.00
|
A package to identify changes in cell state relative to spatial associations |
pekkarr
|
2023-12-06 12:20 (UTC) |
r-survtype
|
1.18.0-1 |
0 |
0.00
|
Subtype Identification with Survival Data |
BioArchLinuxBot
|
2023-10-27 06:31 (UTC) |
r-svmdo
|
1.2.8-1 |
0 |
0.00
|
Identification of Tumor-Discriminating mRNA Signatures via Support Vector Machines Supported by Disease Ontology |
pekkarr
|
2024-01-10 06:07 (UTC) |
r-synapter
|
2.26.0-1 |
0 |
0.00
|
Label-free data analysis pipeline for optimal identification and quantitation |
BioArchLinuxBot
|
2023-10-26 07:47 (UTC) |
r-tadcompare
|
1.12.1-1 |
0 |
0.00
|
TADCompare: Identification and characterization of differential TADs |
BioArchLinuxBot
|
2024-03-02 00:02 (UTC) |
r-tilingarray
|
1.80.0-1 |
0 |
0.00
|
Transcript mapping with high-density oligonucleotide tiling arrays |
BioArchLinuxBot
|
2023-10-26 07:15 (UTC) |
r-tloh
|
1.10.0-1 |
0 |
0.00
|
Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations |
BioArchLinuxBot
|
2023-10-28 14:48 (UTC) |
r-topconfects
|
1.18.0-1 |
0 |
0.00
|
Top Confident Effect Sizes |
BioArchLinuxBot
|
2023-10-25 20:47 (UTC) |
r-toster
|
0.8.2-1 |
0 |
0.00
|
Two One-Sided Tests (TOST) Equivalence Testing |
BioArchLinuxBot
|
2024-04-16 18:02 (UTC) |
r-tsrchitect
|
1.22.0-4 |
0 |
0.00
|
Promoter identification from large-scale TSS profiling data |
BioArchLinuxBot
|
2022-11-04 06:18 (UTC) |
r-tximportdata
|
1.30.0-4 |
0 |
0.00
|
provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project |
pekkarr
|
2024-04-24 22:55 (UTC) |
r-uniqtag
|
1.0.1-6 |
0 |
0.00
|
Abbreviate Strings to Short, Unique Identifiers |
BioArchLinuxBot
|
2024-03-14 18:04 (UTC) |
r-uniquorn
|
2.22.0-1 |
0 |
0.00
|
Identification of cancer cell lines based on their weighted mutational/ variational fingerprint |
BioArchLinuxBot
|
2023-10-27 12:29 (UTC) |
r-uuid
|
1.2.0-1 |
0 |
0.00
|
Tools for generating and handling of UUIDs (Universally Unique Identifiers). |
alhirzel
|
2024-01-17 17:52 (UTC) |
r-varcon
|
1.10.0-1 |
0 |
0.00
|
VarCon: an R package for retrieving neighboring nucleotides of an SNV |
BioArchLinuxBot
|
2023-10-27 11:08 (UTC) |