12 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer
cath-tools-git v0.16.2.r20.g82fb9ac7-2 0 0.00 Protein structure comparison tools such as SSAP and SNAP. anadon
cdd 2018.april.2-1 0 0.00 The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships. anadon
hamap 2018.march.28-2 0 0.00 High-quality Automated and Manual Annotation of Proteins. anadon
hmmer3-2 3-1 0 0.00 Profile hidden Markov models (HMMs) for database searching using consensus sequences containing the version 2 and 3 implementations. anadon
ncoils 2.2.1-1 0 0.00 Rob Russell's attempt to make a COILS program anadon
panther 13.1-2 0 0.00 The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System was designed to classify proteins (and their genes) in order to facilitate high-throughput analysis. anadon
pfam 31.0-1 0 0.00 The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs). anadon
pftools 2.3-3 0 0.00 Contains all the software necessary to build protein and DNA generalized profiles and use them to scan and align sequences, and search databases. anadon
pirsf 80.00-1 0 0.00 The Protein Information Resource (PIR) is an integrated public bioinformatics resource to support genomic, proteomic and systems biology research and scientific studies. anadon
superfamily 1.75-1 0 0.00 anadon
tigrfam 15.0-1 0 0.00 TIGRFAMs is a resource consisting of curated multiple sequence alignments, Hidden Markov Models (HMMs) for protein sequence classification, and associated information designed to support automated annotation of (mostly prokaryotic) proteins. anadon
fingerprintscan 3.5.96-2 1 0.01 Search against FingerPRINTScan with a protein query sequence to identify the closest matching PRINTS sequence motif fingerprints in a protein sequence. anadon

12 packages found. Page 1 of 1.