|
avogadro2-bin
|
1.99.0-2 |
0 |
0.00
|
An advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. |
zxp19821005
|
2024-03-08 07:46 (UTC) |
|
python-rnapolis
|
0.3.10-1 |
0 |
0.00
|
A Python library containing RNA-related bioinformatics functions and classes |
tzok
|
2024-03-19 12:27 (UTC) |
|
jalview
|
2.11.2.0-2 |
12 |
0.00
|
Bioinformatics Multiple Alignment Editor |
PumpkinCheshire
|
2022-03-25 07:22 (UTC) |
|
multiqc
|
1.21-1 |
0 |
0.00
|
Aggregate results from bioinformatics analyses across many samples into a single report |
mschu
|
2024-02-29 17:57 (UTC) |
|
mothur
|
1.48.0-1 |
1 |
0.00
|
A bioinformatics program for analyzing microbial communities. |
meanjollies
|
2024-01-31 02:23 (UTC) |
|
spread
|
1.0.7-6 |
0 |
0.00
|
a user-friendly application to analyze and visualize phylogeographic reconstructions resulting from Bayesian inference of spatio-temporal diffusion. https://doi.org/10.1093/bioinformatics/btr481 |
malacology
|
2023-05-06 15:46 (UTC) |
|
raxml-ng-mpi
|
1.2.1-1 |
0 |
0.00
|
A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305 |
malacology
|
2023-12-22 18:14 (UTC) |
|
raxml-ng
|
1.2.1-1 |
1 |
0.00
|
A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305 |
malacology
|
2023-12-22 18:11 (UTC) |
|
raxml-light
|
1.0.9-1 |
0 |
0.00
|
A tool for computing terabyte phylogenies https://doi.org/10.1093/bioinformatics/bts309 |
malacology
|
2022-08-29 01:53 (UTC) |
|
mptp
|
0.2.5-1 |
0 |
0.00
|
A tool for single-locus species delimitation https://doi.org/10.1093/bioinformatics/btx025 |
malacology
|
2023-09-13 00:01 (UTC) |
|
mpi-bucky
|
1.4.4-2 |
0 |
0.00
|
Bayesian Untangling of Concordance Knots https://doi.org/10.1093/bioinformatics/btq539 |
malacology
|
2022-08-29 18:58 (UTC) |
|
lvb
|
4.2-0 |
0 |
0.00
|
parsimony and simulated annealing in the search for phylogenetic trees https://doi.org/10.1093/bioinformatics/btg402 |
malacology
|
2023-07-29 12:26 (UTC) |
|
libmaus
|
2.0.812_release_20220919125234-3 |
1 |
0.00
|
Bioinformatics data structures and algorithms in C++ |
malacology
|
2022-10-19 16:35 (UTC) |
|
fastdnaml
|
1.2.2-0 |
0 |
0.00
|
A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood https://doi.org/10.1093/bioinformatics/10.1.41 |
malacology
|
2024-02-05 02:14 (UTC) |
|
examl-mpi
|
3.0.22-3 |
1 |
0.00
|
Exascale Maximum Likelihood https://doi.org/10.1093/bioinformatics/btv184 |
malacology
|
2022-08-29 03:55 (UTC) |
|
examl
|
3.0.22-3 |
1 |
0.00
|
Exascale Maximum Likelihood https://doi.org/10.1093/bioinformatics/btv184 |
malacology
|
2022-08-29 03:55 (UTC) |
|
dnastar7activated
|
7.1.0-1 |
0 |
0.00
|
leader in the field of bioinformatics software, including SeqMan Editseq GeneQuest Megalign PrimerSelect Protean SeqBuilder |
malacology
|
2021-05-13 10:00 (UTC) |
|
consel
|
2011.05.12-0 |
0 |
0.00
|
Assessing the confidence of phylogenetic tree selection https://doi.org/10.1093/bioinformatics/17.12.1246 |
malacology
|
2023-02-10 18:37 (UTC) |
|
clann
|
194f8aa-1 |
0 |
0.00
|
constructing consensus trees and supertrees from multiple source trees https://doi.org/10.1093/bioinformatics/bti020 |
malacology
|
2023-07-29 12:02 (UTC) |
|
bucky
|
1.4.4-4 |
0 |
0.00
|
Bayesian Untangling of Concordance Knots https://doi.org/10.1093/bioinformatics/btq539 |
malacology
|
2022-08-28 14:32 (UTC) |
|
btllib
|
1.7.2-1 |
0 |
0.00
|
Bioinformatics Technology Lab common code library https://doi.org/10.21105/joss.04720 |
malacology
|
2024-04-09 00:03 (UTC) |
|
biobambam
|
2.0.185_release_20221211202123-1 |
2 |
0.00
|
BAM file pre-processing utilities for bioinformatics. |
malacology
|
2022-12-12 00:13 (UTC) |
|
bedops
|
2.4.41-2 |
1 |
0.00
|
Highly scalable genomic feature operations. https://doi.org/10.1093/bioinformatics/bts277 |
malacology
|
2023-03-03 07:06 (UTC) |
|
aliview
|
1.28-3 |
0 |
0.00
|
Software for aligning viewing and editing dna/aminoacid sequences https://doi.org/10.1093/bioinformatics/btu531 |
malacology
|
2023-04-25 17:00 (UTC) |
|
python-pybedtools
|
0.10.0-1 |
0 |
0.00
|
python wrapper for BEDTools bioinformatics suite |
kbipinkumar
|
2024-04-10 00:02 (UTC) |
|
python-ncls
|
0.0.68-2 |
0 |
0.00
|
A wrapper for the nested containment list data structure. http://dx.doi.org/10.1093/bioinformatics/btz615 |
kbipinkumar
|
2023-05-19 18:01 (UTC) |
|
nthash-bcgsc
|
2.3.0-3 |
0 |
0.00
|
Fast hash function for DNA/RNA sequences. https://doi.org/10.1093/bioinformatics/btac564 |
kbipinkumar
|
2023-11-09 00:01 (UTC) |
|
cramino
|
0.14.5-1 |
0 |
0.00
|
A fast tool for BAM/CRAM quality evaluation of long reads. https://doi.org/10.1093/bioinformatics/btad311 |
kbipinkumar
|
2024-02-27 18:06 (UTC) |
|
biolibc
|
0.2.6-1 |
0 |
0.00
|
High-performance, memory-efficient bioinformatics library |
kbipinkumar
|
2023-10-23 18:04 (UTC) |
|
abpoa
|
1.5.1-1 |
0 |
0.00
|
SIMD-based C library for fast partial order alignment. https://dx.doi.org/10.1093/bioinformatics/btaa963 |
kbipinkumar
|
2024-01-16 06:03 (UTC) |
|
ugene-cuda
|
50.0-1 |
1 |
0.00
|
A free open-source cross-platform bioinformatics software (with CUDA) |
hottea
|
2024-04-14 06:56 (UTC) |
|
ugene
|
50.0-1 |
1 |
0.00
|
A free open-source cross-platform bioinformatics software |
hottea
|
2024-04-14 06:56 (UTC) |
|
genometools
|
1.6.2-1 |
1 |
0.00
|
A unified set of bioinformatics tools for analyzing genomes |
harrietobrien
|
2022-07-13 11:28 (UTC) |
|
ucsc-kent-genome-tools
|
405-1 |
4 |
0.00
|
UCSC Kent bioinformatics utilities: kent source utilities |
greyltc
|
2020-11-01 19:30 (UTC) |
|
r-rcwlpipelines
|
1.18.1-1 |
0 |
0.00
|
Bioinformatics pipelines based on Rcwl |
BioArchLinuxBot
|
2024-03-26 18:10 (UTC) |
|
r-proloc
|
1.42.0-1 |
0 |
0.00
|
A unifying bioinformatics framework for spatial proteomics |
BioArchLinuxBot
|
2023-10-28 15:07 (UTC) |
|
r-pipeframe
|
1.18.0-1 |
0 |
0.00
|
Pipeline framework for bioinformatics in R |
BioArchLinuxBot
|
2023-10-27 11:05 (UTC) |
|
r-meigor
|
1.36.2-1 |
0 |
0.00
|
MEtaheuristics for bIoinformatics Global Optimization |
BioArchLinuxBot
|
2024-03-20 18:11 (UTC) |
|
r-evaluomer
|
1.18.0-1 |
0 |
0.00
|
Evaluation of Bioinformatics Metrics |
BioArchLinuxBot
|
2023-10-27 08:25 (UTC) |
|
r-envisionquery
|
1.38.0-4 |
0 |
0.00
|
Retrieval from the ENVISION bioinformatics data portal into R |
BioArchLinuxBot
|
2023-04-29 12:44 (UTC) |
|
r-biocgraph
|
1.64.0-1 |
0 |
0.00
|
Graph examples and use cases in Bioinformatics |
BioArchLinuxBot
|
2023-10-26 05:41 (UTC) |
|
bandage
|
0.9.0-1 |
1 |
0.00
|
Bioinformatics Application for Navigating De novo Assembly Graphs Easily |
aorth
|
2023-03-10 13:49 (UTC) |
|
pirsf
|
80.00-1 |
0 |
0.00
|
The Protein Information Resource (PIR) is an integrated public bioinformatics resource to support genomic, proteomic and systems biology research and scientific studies. |
anadon
|
2018-04-02 14:39 (UTC) |
|
merlin-linkage
|
1.1.2-1 |
0 |
0.00
|
Bioinformatics linkage analysis tool |
alex.henrie
|
2016-12-10 22:04 (UTC) |
|
gatk-bin
|
4.5.0.0-1 |
1 |
0.00
|
Variant discovery in high-throughput bioinformatics sequencing data |
46620
|
2023-12-14 18:57 (UTC) |
|
python-scikit-bio
|
0.5.6-1 |
1 |
0.00
|
Python package providing data structures, algorithms, and educational resources for bioinformatics |
orphan
|
2021-01-14 11:54 (UTC) |
|
python-pybedtools-git
|
0.8.0.r138.gffe0d4b-1 |
0 |
0.00
|
Wrapper around BEDTools for bioinformatics work |
orphan
|
2022-01-09 19:17 (UTC) |
|
python-crimson
|
1.0.0-1 |
0 |
0.00
|
Bioinformatics tool outputs converter to JSON or YAML |
orphan
|
2021-10-25 07:33 (UTC) |
|
igvtools
|
2.13.2-1 |
2 |
0.00
|
IGV utilities for preprocessing bioinformatics data files |
orphan
|
2022-07-13 03:37 (UTC) |