18 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer
artemis 16.0.0-1 0 0.00 Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. clintval
bcl2fastq-rpm 2.17.1.14-1 0 0.00 Demultiplexes data and converts BCL files generated by Illumina sequencers to FASTQ for downstream analysis. clintval
bedtools-git v2.26.0.r148.gd1953b65-1 0 0.00 A powerful toolset for genome arithmetic. clintval
fastq_screen 0.11.1-1 0 0.00 A screening application for high througput sequence data clintval
freebayes 1.1.0-1 0 0.00 A tool for finding polymorphisms in high throughput sequence data. clintval
gatk 4.6-1 0 0.00 Genome Analysis Toolkit - Variant Discovery in High-Throughput Sequencing Data clintval
jellyfish-pythonbound 2.2.4-2 0 0.00 A tool for fast, memory-efficient counting of k-mers in DNA clintval
kraken 1.0-1 0 0.00 Kraken taxonomic sequence classification system clintval
mosdepth 0.2.0-1 0 0.00 Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing clintval
pmonitor-git r15.97604f3-1 0 0.00 Progress monitor: monitor a job's progress clintval
python-declxml 0.10.0-1 0 0.00 Declarative XML processing for Python. clintval
python-declxml-git r79.b59c66c-1 0 0.00 Declarative XML processing for Python. clintval
qualimap 2.2.1-1 0 0.00 Evaluating next generation sequencing data clintval
vcf-validator 0.6-1 0 0.00 Validation suite for Variant Call Format (VCF) files, implemented using C++11 clintval
vcfanno 0.2.8-1 0 0.00 Annotate a VCF with other VCFs/BEDs/tabixed files clintval
vcflib-git v1.0.0.rc1.r127.gac59d4f-1 0 0.00 A simple C++ library for parsing and manipulating VCF files, and many command-line utilities clintval
verticalize-git r7.903975a-1 0 0.00 Simple tool to verticalize text delimited files. clintval
vt 0.5772-1 0 0.00 A tool set for short variant discovery in genetic sequence data. clintval

18 packages found. Page 1 of 1.