|
r-multirnaflow
|
1.0.0-3 |
0 |
0.00
|
An R package for analysing RNA-seq raw counts with several biological conditions and different time points |
pekkarr
|
2024-04-27 06:59 (UTC) |
|
r-multihiccompare
|
1.22.0-1 |
0 |
0.00
|
Normalize and detect differences between Hi-C datasets when replicates of each experimental condition are available |
BioArchLinuxBot
|
2024-05-03 00:24 (UTC) |
|
r-msmstests
|
1.42.0-1 |
0 |
0.00
|
LC-MS/MS Differential Expression Tests |
BioArchLinuxBot
|
2024-05-03 04:03 (UTC) |
|
r-monocle
|
2.32.0-1 |
0 |
0.00
|
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq |
BioArchLinuxBot
|
2024-05-02 12:52 (UTC) |
|
r-moda
|
1.30.0-1 |
0 |
0.00
|
MODA: MOdule Differential Analysis for weighted gene co-expression network |
BioArchLinuxBot
|
2024-05-02 20:53 (UTC) |
|
r-mmdiff2
|
1.32.0-1 |
0 |
0.00
|
Statistical Testing for ChIP-Seq data sets |
BioArchLinuxBot
|
2024-05-03 03:14 (UTC) |
|
r-mirnameconverter
|
1.32.0-1 |
0 |
0.00
|
Convert miRNA Names to Different miRBase Versions |
BioArchLinuxBot
|
2024-05-02 01:40 (UTC) |
|
r-mirbaseversions.db
|
1.1.0-4 |
0 |
0.00
|
Collection of mature miRNA names of 22 different miRBase release versions |
BioArchLinuxBot
|
2022-06-06 07:45 (UTC) |
|
r-mirbaseconverter
|
1.26.0-1 |
0 |
0.00
|
A comprehensive and high-efficiency tool for converting and retrieving the information of miRNAs in different miRBase versions |
BioArchLinuxBot
|
2024-04-13 18:01 (UTC) |
|
r-milor
|
1.10.0-1 |
0 |
0.00
|
Differential neighbourhood abundance testing on a graph |
BioArchLinuxBot
|
2023-10-30 18:21 (UTC) |
|
r-microbiomedasim
|
1.18.0-1 |
0 |
0.00
|
Microbiome Differential Abundance Simulation |
BioArchLinuxBot
|
2024-05-02 01:42 (UTC) |
|
r-methylsig
|
1.16.0-1 |
0 |
0.00
|
MethylSig: Differential Methylation Testing for WGBS and RRBS Data |
BioArchLinuxBot
|
2024-05-03 05:35 (UTC) |
|
r-methylmnm
|
1.42.0-1 |
0 |
0.00
|
detect different methylation level (DMR) |
BioArchLinuxBot
|
2024-05-01 19:00 (UTC) |
|
r-methylinheritance
|
1.28.0-1 |
0 |
0.00
|
Permutation-Based Analysis associating Conserved Differentially Methylated Elements Across Multiple Generations to a Treatment Effect |
BioArchLinuxBot
|
2024-05-03 03:38 (UTC) |
|
r-methylgsa
|
1.22.0-1 |
0 |
0.00
|
Gene Set Analysis Using the Outcome of Differential Methylation |
BioArchLinuxBot
|
2024-05-03 15:13 (UTC) |
|
r-methcp
|
1.13.0-3 |
0 |
0.00
|
Differential methylation anlsysis for bisulfite sequencing data |
BioArchLinuxBot
|
2024-04-28 18:24 (UTC) |
|
r-metapod
|
1.12.0-1 |
0 |
0.00
|
Meta-Analyses on P-Values of Differential Analyses |
BioArchLinuxBot
|
2024-05-01 18:13 (UTC) |
|
r-metaboliteidmapping
|
1.0.0-1 |
0 |
0.00
|
Mapping of Metabolite IDs from Different Sources |
BioArchLinuxBot
|
2023-04-29 05:43 (UTC) |
|
r-messina
|
1.40.0-1 |
0 |
0.00
|
Single-gene classifiers and outlier-resistant detection of differential expression for two-group and survival problems |
BioArchLinuxBot
|
2024-05-01 20:25 (UTC) |
|
r-meb
|
1.18.0-1 |
0 |
0.00
|
A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq data |
BioArchLinuxBot
|
2024-05-03 01:39 (UTC) |
|
r-maskbad
|
1.48.0-1 |
0 |
0.00
|
Masking probes with binding affinity differences |
BioArchLinuxBot
|
2024-05-02 01:47 (UTC) |
|
r-masigpro
|
1.76.0-1 |
0 |
0.00
|
Significant Gene Expression Profile Differences in Time Course Gene Expression Data |
BioArchLinuxBot
|
2024-05-01 18:38 (UTC) |
|
r-lrcell
|
1.12.0-1 |
0 |
0.00
|
Differential cell type change analysis using Logistic/linear Regression |
BioArchLinuxBot
|
2024-05-02 02:56 (UTC) |
|
r-lineagepulse
|
1.21.0-1 |
0 |
0.00
|
Differential expression analysis and model fitting for single-cell RNA-seq data |
BioArchLinuxBot
|
2023-10-27 07:57 (UTC) |
|
r-les
|
1.54.0-1 |
0 |
0.00
|
Identifying Differential Effects in Tiling Microarray Data |
BioArchLinuxBot
|
2024-05-01 18:50 (UTC) |
|
r-iseede
|
1.2.0-1 |
0 |
0.00
|
iSEE extension for panels related to differential expression analysis |
pekkarr
|
2024-05-03 18:46 (UTC) |
|
r-indeed
|
2.18.0-1 |
0 |
0.00
|
Interactive Visualization of Integrated Differential Expression and Differential Network Analysis for Biomarker Candidate Selection Package |
BioArchLinuxBot
|
2024-05-01 21:47 (UTC) |
|
r-iggeneusage
|
1.16.0-3 |
0 |
0.00
|
Differential gene usage in immune repertoires |
BioArchLinuxBot
|
2024-02-08 13:24 (UTC) |
|
r-ideal
|
1.26.0-1 |
0 |
0.00
|
Interactive Differential Expression AnaLysis |
BioArchLinuxBot
|
2023-10-28 15:18 (UTC) |
|
r-hummingbird
|
1.14.0-1 |
0 |
0.00
|
Bayesian Hidden Markov Model for the detection of differentially methylated regions |
BioArchLinuxBot
|
2024-05-02 19:22 (UTC) |
|
r-hsmmsinglecell
|
1.24.0-1 |
0 |
0.00
|
Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts (HSMM) |
BioArchLinuxBot
|
2024-05-04 00:25 (UTC) |
|
r-hicdoc
|
1.6.0-1 |
0 |
0.00
|
A/B compartment detection and differential analysis |
pekkarr
|
2024-05-03 02:13 (UTC) |
|
r-hem
|
1.76.0-1 |
0 |
0.00
|
Heterogeneous error model for identification of differentially expressed genes under multiple conditions |
BioArchLinuxBot
|
2024-05-02 12:30 (UTC) |
|
r-gg4way
|
1.2.0-1 |
0 |
0.00
|
4way Plots of Differential Expression |
pekkarr
|
2024-05-02 22:20 (UTC) |
|
r-geodiff
|
1.10.0-1 |
0 |
0.00
|
Count model based differential expression and normalization on GeoMx RNA data |
BioArchLinuxBot
|
2024-05-02 02:28 (UTC) |
|
r-genomicozone
|
1.18.0-1 |
0 |
0.00
|
Delineate outstanding genomic zones of differential gene activity |
BioArchLinuxBot
|
2024-05-03 13:26 (UTC) |
|
r-genetonic
|
2.8.0-1 |
0 |
0.00
|
Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis |
BioArchLinuxBot
|
2024-05-02 22:16 (UTC) |
|
r-generxcluster
|
1.40.0-1 |
0 |
0.00
|
gRx Differential Clustering |
BioArchLinuxBot
|
2024-05-01 22:14 (UTC) |
|
r-gemma.r
|
3.0.2-1 |
0 |
0.00
|
A wrapper for Gemma's Restful API to access curated gene expression data and differential expression analyses |
pekkarr
|
2024-05-05 18:04 (UTC) |
|
r-gdnainrnaseqdata
|
1.4.0-1 |
0 |
0.00
|
RNA-seq data with different levels of gDNA contamination |
pekkarr
|
2024-05-04 01:03 (UTC) |
|
r-fracdiff
|
1.5.3-2 |
0 |
0.00
|
Fractionally Differenced ARIMA aka ARFIMA(P,d,q) Models |
BioArchLinuxBot
|
2024-02-29 18:01 (UTC) |
|
r-flowgraph
|
1.12.0-1 |
0 |
0.00
|
Identifying differential cell populations in flow cytometry data accounting for marker frequency |
BioArchLinuxBot
|
2024-05-01 21:33 (UTC) |
|
r-fishpond
|
2.10.0-1 |
0 |
0.00
|
Fishpond: differential transcript and gene expression with inferential replicates |
BioArchLinuxBot
|
2024-05-02 21:41 (UTC) |
|
r-fci
|
1.34.0-1 |
0 |
0.00
|
f-divergence Cutoff Index for Differential Expression Analysis in Transcriptomics and Proteomics |
BioArchLinuxBot
|
2024-05-01 20:57 (UTC) |
|
r-excluster
|
1.22.0-1 |
0 |
0.00
|
ExCluster robustly detects differentially expressed exons between two conditions of RNA-seq data, requiring at least two independent biological replicates per condition |
BioArchLinuxBot
|
2024-05-03 00:59 (UTC) |
|
r-erccdashboard
|
1.38.0-1 |
0 |
0.00
|
Assess Differential Gene Expression Experiments with ERCC Controls |
BioArchLinuxBot
|
2024-05-01 23:26 (UTC) |
|
r-entropyexplorer
|
1.1-4 |
0 |
0.00
|
Tools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression |
BioArchLinuxBot
|
2022-06-06 01:05 (UTC) |
|
r-emdomics
|
2.34.0-1 |
0 |
0.00
|
Earth Mover's Distance for Differential Analysis of Genomics Data |
BioArchLinuxBot
|
2024-05-01 20:32 (UTC) |
|
r-edge
|
2.36.0-1 |
0 |
0.00
|
Extraction of Differential Gene Expression |
BioArchLinuxBot
|
2024-05-02 02:40 (UTC) |
|
r-ebseq
|
2.2.0-1 |
0 |
0.00
|
An R package for gene and isoform differential expression analysis of RNA-seq data |
BioArchLinuxBot
|
2024-05-02 04:46 (UTC) |