oxdna-cuda-git
|
v3.6.1.r10.g9af1214a-1 |
2 |
0.21
|
DNA/RNA/etc simulator, from lorenzo-rovigatti/oxDNA, with CUDA support and analysis tools. |
cge
|
2024-03-23 10:33 (UTC) |
oxdna-cuda
|
3.6.0-1 |
1 |
0.19
|
DNA/RNA/etc simulator, with CUDA support and analysis tools. |
cge
|
2024-01-27 18:00 (UTC) |
r-minfi
|
1.48.0-1 |
1 |
0.18
|
Analyze Illumina Infinium DNA methylation arrays |
BioArchLinuxBot
|
2023-10-27 11:56 (UTC) |
mednaffe
|
0.9.2-1 |
35 |
0.02
|
front-end (GUI) for mednafen emulator |
Vaporeon
|
2022-01-03 14:32 (UTC) |
libretro-beetle-vb-git
|
817.efa6475-1 |
6 |
0.01
|
Virtual Boy emu - Standalone port of Beetle / Mednafen VB to libretro. |
InstallerLegacy
|
2021-06-24 07:03 (UTC) |
libretro-beetle-pcfx-git
|
r767.84b7ca6-1 |
1 |
0.01
|
Mednafen PCFX libretro core (NEC PC-FX). |
Enverex
|
2018-08-14 13:19 (UTC) |
midna-theme
|
7.0.2-1 |
7 |
0.00
|
KaOS Plasma 6 Look & Feel theme files |
noraj
|
2024-03-08 10:20 (UTC) |
python2-idna
|
2.10-4 |
2 |
0.00
|
Internationalized Domain Names in Applications (IDNA) |
tallero
|
2024-01-29 17:42 (UTC) |
plymouth-theme-dna-git
|
r28.32a0d92-1 |
3 |
0.00
|
The plymouth theme collection by adi1090x |
freundTech
|
2020-09-02 13:29 (UTC) |
diamond
|
2.1.9-1 |
3 |
0.00
|
High performance sequence aligner for protein and translated DNA searches with big sequence data. https://doi.org/10.1038/s41592-021-01101-x |
BioArchLinuxBot
|
2024-01-31 18:09 (UTC) |
x3dna-dssr
|
1.9.10_20200423-1 |
0 |
0.00
|
DSSR, an integrated software tool for Dissecting the Spatial Structure of RNA. Please see: http://forum.x3dna.org/site-announcements/download-instructions/ |
orphan
|
2020-05-13 07:21 (UTC) |
x3dna
|
2.4.4_20190909-1 |
0 |
0.00
|
3DNA is a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid-containing structures. Please see: http://forum.x3dna.org/site-announcements/download-instructions/ |
orphan
|
2019-09-16 08:03 (UTC) |
unandmanager
|
2.1.3-1 |
1 |
0.00
|
A tool to backup a rednand install |
opendata26
|
2017-03-26 13:48 (UTC) |
tcoffee
|
13.46.0.919e8c6b-1 |
6 |
0.00
|
An alignment tool for Protein, DNA and RNA sequences |
mschu
|
2023-08-15 19:00 (UTC) |
speciesidentifier
|
1.9-6 |
1 |
0.00
|
Taxonomy-aware DNA sequence processing toolkit |
malacology
|
2022-12-04 01:53 (UTC) |
sequencematrix
|
1.9-6 |
1 |
0.00
|
Taxonomy-aware DNA sequence processing toolkit |
malacology
|
2022-12-04 01:53 (UTC) |
genbankexplorer
|
1.9-6 |
1 |
0.00
|
Taxonomy-aware DNA sequence processing toolkit |
malacology
|
2022-12-04 01:53 (UTC) |
subread
|
2.0.6-1 |
0 |
0.00
|
a general-purpose read aligner which can align both genomic DNA-seq and RNA-seq reads, https://doi.org/10.1093/nar/gkt214 |
kbipinkumar
|
2023-05-10 06:01 (UTC) |
staden-io_lib
|
1.15.0-1 |
6 |
0.00
|
DNA sequence assembly (Gap4) and editing and analysis tools (Spin) |
mschu
|
2023-06-13 20:37 (UTC) |
staden
|
2.0.0b11-2 |
8 |
0.00
|
Tools for DNA sequence assembly (Gap4/5), editing and analysis (Spin) |
mschu
|
2021-07-20 08:56 (UTC) |
spaln
|
3.0.2-2 |
0 |
0.00
|
Splicing-aware transcript (cDNA/EST or protein sequences) alignment to genomic DNA |
kbipinkumar
|
2023-11-17 07:09 (UTC) |
snap-dna-git
|
v0.15.r199.ea6690f-1 |
0 |
0.00
|
Scalable Nucleotide Alignment Program |
xihh
|
2016-10-09 03:11 (UTC) |
regtools-git
|
1.0.0.r0.3068563-1 |
0 |
0.00
|
Tools that integrate DNA-seq and RNA-seq data to help interpret mutations in a regulatory and splicing context |
levitsky
|
2023-01-30 20:37 (UTC) |
r-triplex
|
1.42.0-1 |
0 |
0.00
|
Search and visualize intramolecular triplex-forming sequences in DNA |
BioArchLinuxBot
|
2023-10-26 03:06 (UTC) |
r-stepnorm
|
1.74.0-1 |
0 |
0.00
|
Stepwise normalization functions for cDNA microarrays |
BioArchLinuxBot
|
2023-10-26 07:03 (UTC) |
r-soniclength
|
1.4.7-9 |
0 |
0.00
|
Estimating Abundance of Clones from DNA Fragmentation Data |
BioArchLinuxBot
|
2024-03-07 00:04 (UTC) |
r-sesame
|
1.20.0-1 |
0 |
0.00
|
SEnsible Step-wise Analysis of DNA MEthylation BeadChips |
BioArchLinuxBot
|
2023-10-27 07:23 (UTC) |
r-seqlogo
|
1.68.0-2 |
0 |
0.00
|
Sequence logos for DNA sequence alignments |
BioArchLinuxBot
|
2024-03-07 12:11 (UTC) |
r-scope
|
1.14.0-1 |
0 |
0.00
|
A normalization and copy number estimation method for single-cell DNA sequencing |
BioArchLinuxBot
|
2023-10-27 11:31 (UTC) |
r-scmet
|
1.4.0-3 |
0 |
0.00
|
Bayesian modelling of cell-to-cell DNA methylation heterogeneity |
pekkarr
|
2024-02-08 13:59 (UTC) |
r-rprimer
|
1.6.0-1 |
0 |
0.00
|
Design Degenerate Oligos from a Multiple DNA Sequence Alignment |
pekkarr
|
2023-12-12 20:26 (UTC) |
r-reffreeewas
|
2.2-11 |
0 |
0.00
|
EWAS using Reference-Free DNA Methylation Mixture Deconvolution |
BioArchLinuxBot
|
2022-11-27 06:01 (UTC) |
r-recountmethylation
|
1.12.0-1 |
0 |
0.00
|
Access and analyze DNA methylation database compilations |
BioArchLinuxBot
|
2023-10-27 13:31 (UTC) |
r-qdnaseq
|
1.38.0-1 |
0 |
0.00
|
Quantitative DNA Sequencing for Chromosomal Aberrations |
BioArchLinuxBot
|
2023-10-26 07:52 (UTC) |
r-pscbs
|
0.67.0-1 |
0 |
0.00
|
Analysis of Parent-Specific DNA Copy Numbers |
BioArchLinuxBot
|
2024-02-18 00:02 (UTC) |
r-podcall
|
1.10.1-1 |
0 |
0.00
|
Positive Droplet Calling for DNA Methylation Droplet Digital PCR |
BioArchLinuxBot
|
2024-01-18 00:05 (UTC) |
r-plasmut
|
1.0.0-1 |
0 |
0.00
|
Stratifying mutations observed in cell-free DNA and white blood cells as germline, hematopoietic, or somatic |
pekkarr
|
2023-11-28 11:42 (UTC) |
r-planet
|
1.10.0-1 |
0 |
0.00
|
Placental DNA methylation analysis tools |
BioArchLinuxBot
|
2023-10-25 20:42 (UTC) |
r-periodicdna
|
1.12.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2023-10-27 11:22 (UTC) |
r-nnnorm
|
2.66.0-1 |
0 |
0.00
|
Spatial and intensity based normalization of cDNA microarray data based on robust neural nets |
BioArchLinuxBot
|
2023-10-26 07:01 (UTC) |
r-msa2dist
|
1.6.0-1 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2023-10-26 02:35 (UTC) |
r-motifstack
|
1.46.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2023-10-27 13:18 (UTC) |
r-motifdb
|
1.44.0-1 |
0 |
0.00
|
An Annotated Collection of Protein-DNA Binding Sequence Motifs |
BioArchLinuxBot
|
2023-10-27 09:12 (UTC) |
r-motifcounter
|
1.26.0-1 |
0 |
0.00
|
R package for analysing TFBSs in DNA sequences |
BioArchLinuxBot
|
2023-10-26 03:00 (UTC) |
r-methylpipe
|
1.36.0-1 |
0 |
0.00
|
Base resolution DNA methylation data analysis |
BioArchLinuxBot
|
2023-10-27 15:02 (UTC) |
r-methylkit
|
1.28.0-1 |
0 |
0.00
|
DNA methylation analysis from high-throughput bisulfite sequencing results |
BioArchLinuxBot
|
2023-10-27 09:18 (UTC) |
r-methylclock
|
1.8.0-1 |
0 |
0.00
|
Methylclock - DNA methylation-based clocks |
BioArchLinuxBot
|
2023-10-28 13:41 (UTC) |
r-methylcc
|
1.16.0-1 |
0 |
0.00
|
Estimate the cell composition of whole blood in DNA methylation samples |
BioArchLinuxBot
|
2023-10-27 14:36 (UTC) |
r-methylaid
|
1.36.0-1 |
0 |
0.00
|
Visual and interactive quality control of large Illumina DNA Methylation array data sets |
BioArchLinuxBot
|
2023-10-27 13:26 (UTC) |
r-methreg
|
1.12.0-1 |
0 |
0.00
|
Assessing the regulatory potential of DNA methylation regions or sites on gene transcription |
BioArchLinuxBot
|
2023-10-27 09:00 (UTC) |