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r-msstatstmtptm
|
1.1.2-3 |
0 |
0.00
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Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling |
BioArchLinuxBot
|
2022-06-07 13:18 (UTC) |
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r-msstatstmt
|
2.10.0-1 |
0 |
0.00
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Protein Significance Analysis in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling |
BioArchLinuxBot
|
2023-10-26 07:35 (UTC) |
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r-msstatsshiny
|
1.4.3-1 |
0 |
0.00
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MSstats GUI for Statistical Anaylsis of Proteomics Experiments |
pekkarr
|
2024-03-06 12:01 (UTC) |
|
r-msstatssamplesize
|
1.13.0-2 |
0 |
0.00
|
Simulation tool for optimal design of high-dimensional MS-based proteomics experiment |
BioArchLinuxBot
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2024-02-12 12:10 (UTC) |
|
r-msstatsqc
|
2.20.0-1 |
0 |
0.00
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Longitudinal system suitability monitoring and quality control for proteomic experiments |
BioArchLinuxBot
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2023-10-26 07:42 (UTC) |
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r-msstatslip
|
1.8.2-1 |
0 |
0.00
|
LiP Significance Analysis in shotgun mass spectrometry-based proteomic experiments |
BioArchLinuxBot
|
2024-04-06 00:29 (UTC) |
|
r-msstats
|
4.10.1-1 |
0 |
0.00
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Protein Significance Analysis in DDA, SRM and DIA for Label-free or Label-based Proteomics Experiments |
BioArchLinuxBot
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2024-03-02 12:02 (UTC) |
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r-msquality
|
1.2.1-1 |
0 |
0.00
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Quality metric calculation from Spectra and MsExperiment objects |
pekkarr
|
2024-02-23 00:31 (UTC) |
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r-msigdb
|
1.10.0-1 |
0 |
0.00
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An ExperimentHub Package for the Molecular Signatures Database (MSigDB) |
BioArchLinuxBot
|
2023-10-27 05:32 (UTC) |
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r-msexperiment
|
1.4.0-1 |
0 |
0.00
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Infrastructure for Mass Spectrometry Experiments |
BioArchLinuxBot
|
2023-10-26 13:53 (UTC) |
|
r-msdatahub
|
1.2.0-1 |
0 |
0.00
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Mass Spectrometry Data on ExperimentHub |
pekkarr
|
2023-11-07 17:20 (UTC) |
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r-motif2site
|
1.6.0-1 |
0 |
0.00
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Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions |
pekkarr
|
2023-12-11 11:35 (UTC) |
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r-moleculeexperiment
|
1.2.2-1 |
0 |
0.00
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Prioritising a molecule-level storage of Spatial Transcriptomics Data |
pekkarr
|
2023-11-06 17:24 (UTC) |
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r-mirmine
|
1.24.0-1 |
0 |
0.00
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Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment |
BioArchLinuxBot
|
2024-04-13 18:03 (UTC) |
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r-medme
|
1.62.0-1 |
0 |
0.00
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Modelling Experimental Data from MeDIP Enrichment |
BioArchLinuxBot
|
2023-10-26 03:08 (UTC) |
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r-matchbox
|
1.44.0-2 |
0 |
0.00
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Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis |
BioArchLinuxBot
|
2024-03-29 18:08 (UTC) |
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r-marinerdata
|
1.2.0-1 |
0 |
0.00
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ExperimentHub data for the mariner package |
pekkarr
|
2023-11-01 12:08 (UTC) |
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r-loomexperiment
|
1.20.0-1 |
0 |
0.00
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LoomExperiment container |
BioArchLinuxBot
|
2023-10-27 08:03 (UTC) |
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r-lmdme
|
1.44.0-1 |
0 |
0.00
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Linear Model decomposition for Designed Multivariate Experiments |
BioArchLinuxBot
|
2023-10-26 06:20 (UTC) |
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r-lapmix
|
1.68.0-2 |
0 |
0.00
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Laplace Mixture Model in Microarray Experiments |
BioArchLinuxBot
|
2024-04-18 18:32 (UTC) |
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r-ivygapse
|
1.24.0-1 |
0 |
0.00
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A SummarizedExperiment for Ivy-GAP data |
BioArchLinuxBot
|
2023-10-27 06:03 (UTC) |
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r-isocorrector
|
1.20.0-1 |
0 |
0.00
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Correction for natural isotope abundance and tracer purity in MS and MS/MS data from stable isotope labeling experiments |
BioArchLinuxBot
|
2023-10-25 20:43 (UTC) |
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r-iseehub
|
1.4.0-1 |
0 |
0.00
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iSEE for the Bioconductor ExperimentHub |
pekkarr
|
2023-12-01 11:24 (UTC) |
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r-isee
|
2.14.0-1 |
0 |
0.00
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Interactive SummarizedExperiment Explorer |
BioArchLinuxBot
|
2023-10-28 14:41 (UTC) |
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r-infinityflow
|
1.12.0-1 |
0 |
0.00
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Augmenting Massively Parallel Cytometry Experiments Using Multivariate Non-Linear Regressions |
BioArchLinuxBot
|
2023-10-26 01:33 (UTC) |
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r-hicexperiment
|
1.2.0-1 |
0 |
0.00
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Bioconductor class for interacting with Hi-C files in R |
pekkarr
|
2023-11-01 12:17 (UTC) |
|
r-genomicsupersignature
|
1.10.0-1 |
0 |
0.00
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Interpretation of RNA-seq experiments through robust, efficient comparison to public databases |
BioArchLinuxBot
|
2023-10-27 06:56 (UTC) |
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r-genemeta
|
1.74.0-1 |
0 |
0.00
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MetaAnalysis for High Throughput Experiments |
BioArchLinuxBot
|
2023-10-26 05:38 (UTC) |
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r-genefilter
|
1.84.0-1 |
0 |
0.00
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genefilter: methods for filtering genes from high-throughput experiments |
BioArchLinuxBot
|
2023-10-26 05:16 (UTC) |
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r-fission
|
1.22.0-1 |
0 |
0.00
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RangedSummarizedExperiment for time course RNA-Seq of fission yeast in response to stress, by Leong et al., Nat Commun 2014. |
BioArchLinuxBot
|
2023-10-27 05:43 (UTC) |
|
r-fdrame
|
1.74.0-2 |
0 |
0.00
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FDR adjustments of Microarray Experiments (FDR-AME) |
BioArchLinuxBot
|
2024-03-27 18:02 (UTC) |
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r-factdesign
|
1.78.0-2 |
0 |
0.00
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Factorial designed microarray experiment analysis |
BioArchLinuxBot
|
2024-04-14 18:04 (UTC) |
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r-experimentsubset
|
1.12.0-1 |
0 |
0.00
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Manages subsets of data with Bioconductor Experiment objects |
BioArchLinuxBot
|
2023-10-27 09:56 (UTC) |
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r-experimenthubdata
|
1.28.0-1 |
0 |
0.00
|
Add resources to ExperimentHub |
BioArchLinuxBot
|
2023-10-27 13:39 (UTC) |
|
r-experimenthub
|
2.10.0-3 |
0 |
0.00
|
Client to access ExperimentHub resources |
BioArchLinuxBot
|
2023-10-27 05:08 (UTC) |
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r-erccdashboard
|
1.36.0-1 |
0 |
0.00
|
Assess Differential Gene Expression Experiments with ERCC Controls |
BioArchLinuxBot
|
2023-10-26 06:48 (UTC) |
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r-ebseqhmm
|
1.35.0-1 |
0 |
0.00
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Bayesian analysis for identifying gene or isoform expression changes in ordered RNA-seq experiments |
BioArchLinuxBot
|
2023-10-26 06:46 (UTC) |
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r-dnabarcodes
|
1.32.0-1 |
0 |
0.00
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A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments |
BioArchLinuxBot
|
2023-10-25 19:43 (UTC) |
|
r-dnabarcodecompatibility
|
1.18.0-1 |
0 |
0.00
|
A Tool for Optimizing Combinations of DNA Barcodes Used in Multiplexed Experiments on Next Generation Sequencing Platforms |
BioArchLinuxBot
|
2023-10-25 22:06 (UTC) |
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r-dicekriging
|
1.6.0-1 |
0 |
0.00
|
Kriging Methods for Computer Experiments |
orphan
|
2022-01-18 19:08 (UTC) |
|
r-dicedesign
|
1.10-1 |
0 |
0.00
|
Designs of Computer Experiments |
pekkarr
|
2023-12-07 18:02 (UTC) |
|
r-desubs
|
1.28.0-1 |
0 |
0.00
|
DEsubs: an R package for flexible identification of differentially expressed subpathways using RNA-seq expression experiments |
BioArchLinuxBot
|
2023-10-28 12:24 (UTC) |
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r-daewr
|
1.2.11-2 |
0 |
0.00
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Design and Analysis of Experiments with R |
BioArchLinuxBot
|
2024-04-07 18:12 (UTC) |
|
r-cytoglmm
|
1.10.0-1 |
0 |
0.00
|
Conditional Differential Analysis for Flow and Mass Cytometry Experiments |
BioArchLinuxBot
|
2023-10-26 01:17 (UTC) |
|
r-cytofpower
|
1.8.0-1 |
0 |
0.00
|
Power analysis for CyTOF experiments |
BioArchLinuxBot
|
2023-10-28 15:12 (UTC) |
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r-curatedtcgadata
|
1.24.1-1 |
0 |
0.00
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Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects |
BioArchLinuxBot
|
2024-02-07 00:15 (UTC) |
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r-clusterexperiment
|
2.22.0-2 |
0 |
0.00
|
Compare Clusterings for Single-Cell Sequencing |
BioArchLinuxBot
|
2024-04-15 18:32 (UTC) |
|
r-chipsim
|
1.56.0-1 |
0 |
0.00
|
Simulation of ChIP-seq experiments |
BioArchLinuxBot
|
2023-10-27 09:43 (UTC) |
|
r-chippeakanno
|
3.36.1-1 |
0 |
0.00
|
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges |
BioArchLinuxBot
|
2024-02-18 00:08 (UTC) |
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r-categorycompare
|
1.46.0-1 |
0 |
0.00
|
Meta-analysis of high-throughput experiments using feature annotations |
BioArchLinuxBot
|
2023-10-26 06:04 (UTC) |