| aliview |
1.18-1 |
1 |
0.00 |
Software for aligning viewing and editing dna/aminoacid sequences. |
iosonofabio
|
| bcl2fastq |
2.19.0-1 |
0 |
0.00 |
Demultiplexes data and converts BCL files generated by Illumina sequencers to FASTQ for downstream analysis. |
iosonofabio
|
| cellranger |
1.3.1-3 |
0 |
0.00 |
Data analysis for 10X Genomics sequencing libraries. |
iosonofabio
|
| iva |
0.10.1-1 |
0 |
0.00 |
Iterative Virus Assembler |
iosonofabio
|
| kmc |
2.0-2 |
0 |
0.00 |
Count k-mers in a set of reads from genome sequencing projects |
iosonofabio
|
| metabat |
0.32.4-1 |
0 |
0.00 |
An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities. |
iosonofabio
|
| prodigal |
2.6.3-1 |
0 |
0.00 |
Fast, reliable protein-coding gene prediction for prokaryotic genomes. |
iosonofabio
|
| python-bz2file |
0.98-1 |
0 |
0.00 |
Python library for reading and writing bzip2-compressed files |
iosonofabio
|
| python-cachecontrol |
0.12.1-1 |
0 |
0.00 |
httplib2 caching for requests |
iosonofabio
|
| python-contextlib2 |
0.5.1-1 |
0 |
0.00 |
contextlib2 is a backport of the standard library’s contextlib module to earlier Python versions |
iosonofabio
|
| python-fastaq-git |
v1.7.0.r0.g360153c-2 |
0 |
0.00 |
Manipulate FASTA and FASTQ files. |
iosonofabio
|
| python-hdbscan |
0.8.4-1 |
0 |
0.00 |
Hierarchical Density-Based Spatial Clustering of Applications with Noise |
iosonofabio
|
| python-htseq |
0.7.2-1 |
0 |
0.00 |
framework to process and analyze data from high-throughput sequencing assays |
iosonofabio
|
| python-pysam |
0.11.2-1 |
8 |
0.65 |
Python interface for the SAM/BAM sequence alignment and mapping format |
iosonofabio
|
| python-scikit-bio |
0.5.1-1 |
0 |
0.00 |
Python package providing data structures, algorithms, and educational resources for bioinformatics |
iosonofabio
|
| python2-ffpopsim-git |
20130404-5 |
2 |
0.00 |
Fast Forward Population Genetic Simulation |
iosonofabio
|
| python2-pysam |
0.11.2-1 |
5 |
0.00 |
Python interface for the SAM/BAM sequence alignment and mapping format |
iosonofabio
|
| python2-pysang |
0.3.9-1 |
1 |
0.00 |
A Sanger chromatograph viewer. |
iosonofabio
|
| singularity-container-git |
2.2.r500.g6007d3a1-1 |
0 |
0.00 |
Container platform focused on supporting "Mobility of Compute". |
iosonofabio
|
| stampy |
1.0.29-1 |
1 |
0.00 |
Mapper of short reads from illumina sequencing machines onto a reference genome |
iosonofabio
|
| vim-signature-git |
1479704793-1 |
0 |
0.00 |
Plugin to toggle, display and navigate marks for vim |
iosonofabio
|