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r-tximport
|
1.30.0-5 |
0 |
0.00
|
Import and summarize transcript-level estimates for transcript- and gene-level analysis |
BioArchLinuxBot
|
2024-04-24 20:35 (UTC) |
|
r-tximeta
|
1.20.3-1 |
0 |
0.00
|
Transcript Quantification Import with Automatic Metadata |
BioArchLinuxBot
|
2024-01-31 00:07 (UTC) |
|
r-txcutr
|
1.8.0-1 |
0 |
0.00
|
Transcriptome CUTteR |
BioArchLinuxBot
|
2023-10-27 10:33 (UTC) |
|
r-ttservice
|
0.4.0-2 |
0 |
0.00
|
A Service for Tidy Transcriptomics Software Suite |
BioArchLinuxBot
|
2024-04-25 22:54 (UTC) |
|
r-trigger
|
1.48.0-1 |
0 |
0.00
|
Transcriptional Regulatory Inference from Genetics of Gene ExpRession |
BioArchLinuxBot
|
2023-10-26 07:31 (UTC) |
|
r-trena
|
1.24.0-1 |
0 |
0.00
|
Fit transcriptional regulatory networks using gene expression, priors, machine learning |
BioArchLinuxBot
|
2024-04-13 18:18 (UTC) |
|
r-trare
|
1.5.0-4 |
0 |
0.00
|
Transcriptional Rewiring |
BioArchLinuxBot
|
2023-04-29 05:33 (UTC) |
|
r-transcriptr
|
1.30.0-1 |
0 |
0.00
|
An Integrative Tool for ChIP- And RNA-Seq Based Primary Transcripts Detection and Quantification |
BioArchLinuxBot
|
2023-10-28 14:28 (UTC) |
|
r-transcriptogramer
|
1.24.0-1 |
0 |
0.00
|
Transcriptional analysis based on transcriptograms |
BioArchLinuxBot
|
2023-10-26 06:40 (UTC) |
|
r-tloh
|
1.10.0-1 |
0 |
0.00
|
Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations |
BioArchLinuxBot
|
2023-10-28 14:48 (UTC) |
|
r-tin
|
1.34.0-1 |
0 |
0.00
|
Transcriptome instability analysis |
BioArchLinuxBot
|
2023-10-26 05:00 (UTC) |
|
r-tilingarray
|
1.80.0-1 |
0 |
0.00
|
Transcript mapping with high-density oligonucleotide tiling arrays |
BioArchLinuxBot
|
2023-10-26 07:15 (UTC) |
|
r-tigre
|
1.56.0-1 |
0 |
0.00
|
Transcription factor Inference through Gaussian process Reconstruction of Expression |
BioArchLinuxBot
|
2023-10-26 05:19 (UTC) |
|
r-tidybulk
|
1.14.3-1 |
0 |
0.00
|
Brings transcriptomics to the tidyverse |
BioArchLinuxBot
|
2023-12-06 00:13 (UTC) |
|
r-tictoc
|
1.2.1-1 |
0 |
0.00
|
Functions for Timing R Scripts, as Well as Implementations of "Stack" and "StackList" Structures |
BioArchLinuxBot
|
2024-03-18 06:02 (UTC) |
|
r-this.path
|
2.4.0-1 |
0 |
0.00
|
Get Executing Script's Path |
BioArchLinuxBot
|
2024-02-17 12:01 (UTC) |
|
r-tfhaz
|
1.24.0-1 |
0 |
0.00
|
Transcription Factor High Accumulation Zones |
BioArchLinuxBot
|
2023-10-27 13:11 (UTC) |
|
r-tfea.chip
|
1.22.0-1 |
0 |
0.00
|
Analyze Transcription Factor Enrichment |
BioArchLinuxBot
|
2023-10-27 10:37 (UTC) |
|
r-tfbstools
|
1.40.0-1 |
0 |
0.00
|
Software Package for Transcription Factor Binding Site (TFBS) Analysis |
BioArchLinuxBot
|
2023-10-27 11:45 (UTC) |
|
r-tfarm
|
1.24.0-1 |
0 |
0.00
|
Transcription Factors Association Rules Miner |
BioArchLinuxBot
|
2023-10-26 02:18 (UTC) |
|
r-target
|
1.16.0-1 |
0 |
0.00
|
Predict Combined Function of Transcription Factors |
BioArchLinuxBot
|
2023-10-26 02:22 (UTC) |
|
r-tadar
|
1.0.0-1 |
0 |
0.00
|
Transcriptome Analysis of Differential Allelic Representation |
pekkarr
|
2023-11-28 20:25 (UTC) |
|
r-table1
|
1.4.3-1 |
0 |
0.00
|
Tables of Descriptive Statistics in HTML |
haruomaki
|
2023-08-12 09:07 (UTC) |
|
r-svaretro
|
1.8.0-1 |
0 |
0.00
|
Retrotransposed transcript detection from structural variants |
BioArchLinuxBot
|
2023-10-27 14:05 (UTC) |
|
r-stexampledata
|
1.10.1-1 |
0 |
0.00
|
Collection of spatially-resolved transcriptomics datasets in SpatialExperiment Bioconductor format |
pekkarr
|
2024-03-20 00:06 (UTC) |
|
r-stdeconvolve
|
1.6.0-3 |
0 |
0.00
|
Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data |
pekkarr
|
2024-04-25 19:22 (UTC) |
|
r-standr
|
1.6.0-1 |
0 |
0.00
|
Spatial transcriptome analyses of Nanostring's DSP data in R |
pekkarr
|
2023-12-13 11:38 (UTC) |
|
r-srgnet
|
1.16.0-4 |
0 |
0.00
|
An R package for studying synergistic response to gene mutations from transcriptomics data |
BioArchLinuxBot
|
2022-11-26 16:01 (UTC) |
|
r-spotlight
|
1.6.7-1 |
0 |
0.00
|
`SPOTlight`: Spatial Transcriptomics Deconvolution |
pekkarr
|
2024-04-13 10:30 (UTC) |
|
r-spotclean
|
1.4.1-1 |
0 |
0.00
|
SpotClean adjusts for spot swapping in spatial transcriptomics data |
pekkarr
|
2023-12-06 11:53 (UTC) |
|
r-splinter
|
1.28.0-1 |
0 |
0.00
|
Splice Interpreter of Transcripts |
BioArchLinuxBot
|
2023-10-27 15:03 (UTC) |
|
r-splicingfactory
|
1.10.0-1 |
0 |
0.00
|
Splicing Diversity Analysis for Transcriptome Data |
BioArchLinuxBot
|
2023-10-27 06:59 (UTC) |
|
r-spatiallibd
|
1.14.1-2 |
0 |
0.00
|
an R/Bioconductor package to visualize spatially-resolved transcriptomics data |
pekkarr
|
2023-12-15 12:55 (UTC) |
|
r-spatialcpie
|
1.18.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2023-10-28 12:18 (UTC) |
|
r-spaniel
|
1.16.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2023-10-31 18:54 (UTC) |
|
r-smite
|
1.30.0-1 |
0 |
0.00
|
Significance-based Modules Integrating the Transcriptome and Epigenome |
BioArchLinuxBot
|
2023-10-28 13:02 (UTC) |
|
r-signifinder
|
1.4.0-1 |
0 |
0.00
|
Implementations of transcriptional cancer signatures |
pekkarr
|
2023-12-05 11:44 (UTC) |
|
r-saturn
|
1.10.0-1 |
0 |
0.00
|
Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications |
BioArchLinuxBot
|
2023-10-27 05:58 (UTC) |
|
r-rtrm
|
1.40.0-1 |
0 |
0.00
|
Identification of Transcriptional Regulatory Modules from Protein-Protein Interaction Networks |
BioArchLinuxBot
|
2023-10-26 04:17 (UTC) |
|
r-rtnsurvival
|
1.26.0-1 |
0 |
0.00
|
Survival analysis using transcriptional networks inferred by the RTN package |
BioArchLinuxBot
|
2023-10-28 14:22 (UTC) |
|
r-rtn
|
2.26.0-1 |
0 |
0.00
|
RTN: Reconstruction of Transcriptional regulatory Networks and analysis of regulons |
BioArchLinuxBot
|
2023-10-28 12:51 (UTC) |
|
r-rsvg
|
2.6.0-2 |
0 |
0.00
|
Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or Bitmap Arrays |
BioArchLinuxBot
|
2024-04-25 07:16 (UTC) |
|
r-rnamodr.ml
|
1.16.0-1 |
0 |
0.00
|
Detecting patterns of post-transcriptional modifications using machine learning |
BioArchLinuxBot
|
2023-11-02 12:17 (UTC) |
|
r-rnamodr
|
1.16.0-1 |
0 |
0.00
|
Detection of post-transcriptional modifications in high throughput sequencing data |
BioArchLinuxBot
|
2023-11-02 12:10 (UTC) |
|
r-rnaagecalc
|
1.14.0-1 |
0 |
0.00
|
A multi-tissue transcriptional age calculator |
BioArchLinuxBot
|
2023-10-27 15:42 (UTC) |
|
r-rjsonio
|
1.3.1.9-3 |
0 |
0.00
|
Serialize R Objects to JSON, JavaScript Object Notation |
BioArchLinuxBot
|
2024-04-24 19:58 (UTC) |
|
r-rgraph2js
|
1.30.0-1 |
0 |
0.00
|
Convert a Graph into a D3js Script |
BioArchLinuxBot
|
2023-10-25 23:35 (UTC) |
|
r-rgntx
|
1.4.0-1 |
0 |
0.00
|
Colocalization analysis of transcriptome elements in the presence of isoform heterogeneity and ambiguity |
pekkarr
|
2023-12-05 11:28 (UTC) |
|
r-retrofit
|
1.2.0-4 |
0 |
0.00
|
Reference-free deconvolution of cell mixtures in spatial transcriptomics |
pekkarr
|
2024-04-25 07:58 (UTC) |
|
r-regionalst
|
1.0.1-1 |
0 |
0.00
|
Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data |
pekkarr
|
2024-04-12 17:46 (UTC) |