324 packages found. Page 1 of 7.

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Name Version Votes Popularity? Description Maintainer
abc-git 1.01-1 1 0.00 System for Sequential Logic Synthesis and Formal Verification spaceships
abyss 2.2.4-1 1 0.00 Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler Synchronicity
aha-git 0.4.6.1-4 9 0.00 Ansi HTML Adapter: convert ANSI escape sequences to HTML. Xyne
alignace 1.0-6 0 0.00 Program that finds sequence elements conserved in a set of DNA sequences allencch
alsa-patch-bay 1.0.0-1 2 0.00 A graphical patch bay for the ALSA sequencer API and the JACK audio API masutu
apngasm-bin 2.91-1 0 0.00 Creates APNG animation from PNG/TGA image sequence ragouel
aseqview 0.2.8-1 1 0.00 An ALSA sequencer user-client which works as event viewer. masutu
athena-jot 9.0-2 2 0.00 print sequential or random data. ginjiro
bamrescue 0.2.0-1 0 0.00 Utility to check Binary Sequence Alignment / Map (BAM) files for corruption and repair them Arkanosis
bcl2fastq 2.19.0-1 0 0.00 Demultiplexes data and converts BCL files generated by Illumina sequencers to FASTQ for downstream analysis. iosonofabio
bcl2fastq-bin 2.20.0.422-2 0 0.00 Demultiplexes data and converts BCL files generated by Illumina sequencers to FASTQ for downstream analysis balwierz
bdelta-git 1:0.3.1.post2+g4782c58_20160919.fefefilesize-1 0 0.00 A tool to create diffs of binary files. A sophisticated sequence matching library bundled with a delta creator and patch tool. dreieck
beads 1.1-1 0 0.00 Bias Elimination Algorithm for Deep Sequencing. orphan
beagle-lib 1:3.1.2-3 5 0.00 general purpose library for evaluating the likelihood of sequence evolution on trees orphan
bedtools 2.29.2-1 14 0.00 powerful toolset for genome arithmetic balwierz
bfast 0.7.0a-2 1 0.00 Blat-like Fast Accurate Search Tool; facilitates the fast and accurate mapping of short reads to reference sequences Synchronicity
bioprospector 2004-3 0 0.00 A DNA seqence motif finding programs allencch
bjumblr.lv2-git 1.4.2.r0.gfd90fae-2 0 0.00 A pattern-controlled audio stream re-sequencer LV2 plugin (git version) milk
blat 35-1 2 0.00 The BLAST-like Alignment Tool: fast sequence search command line tool Synchronicity
bowtie 1.2.3-1 8 0.00 Bowtie is an alignment tool for short nucleotide sequences against long templates Athemis
bowtie2 2.3.5.1-1 15 0.00 Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequence. greyltc
bowtie2-git v2.2.9.r9.g9c90266-1 0 0.00 Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequence. greyltc
bsequencer-git 1.8.0.r0.g8f96f92-1 0 0.00 Multi channel MIDI step sequencer LV2 plugin (git version) milk
bslizr-git 1.2.8.r0.gf988a45-1 0 0.00 Sequenced audio slicing effect LV2 plugin (git version) milk
canu 1.9-1 0 0.00 Fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION) robymetallo
canu-bin 2.1-1 0 0.00 A fork of the Celera Assembler designed for high-noise single-molecule sequencing Chocobo1
canu-git r10255.g6d274143e-1 0 0.00 A fork of the Celera Assembler designed for high-noise single-molecule sequencing Chocobo1
cd-hit 4.8.1-1 2 0.00 clustering DNA/protein sequence database at high identity with tolerance orphan
cdd 2018.april.2-1 0 0.00 The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships. anadon
cellranger 1.3.1-3 0 0.00 Data analysis for 10X Genomics sequencing libraries. iosonofabio
chromasig-seq 1.0-1 0 0.00 ChromaSig is an unsupervised learning method to search for common patterns (motifs) of histone modifications. Chromasig was proposed by Gary Hon et al orphan
cmd-markdown 2.0-3 6 0.00 An enhanced Markdown editor with MathJax, flowchart & sequence-diagram support Knight
comet-ms-bin 2019.01.5-2 0 0.00 Comet: an open source tandem mass spectrometry (MS/MS) sequence database search tool levitsky
crfsuite 0.12-1 2 0.00 An implementation of Conditional Random Fields (CRFs) for labeling sequential data. tavianator
cufflinks 2.2.1-5 2 0.00 Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.. greyltc
cufflinks-bin 2.2.1-1 2 0.00 Transcriptome assembly and differential expression analysis for RNA-Seq. vejnar
cufflinks-git v2.2.1.r83.gb4fa050-1 0 0.00 Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.. greyltc
cuse 0.5-1 3 0.00 MIDI sequencer for the terminal orphan
cutepeaks 0.2.3-1 0 0.00 A simple viewer for Sanger sequencing files Stunts
dafs-git 0.0.2.6.g8b19266-1 0 0.00 DAFS: simultaneous aligning and folding of RNA sequences by dual decomposition khughitt
dialign 2.2.1-3 1 0.00 Multiple sequence alignment program boenki
diamond-aligner 0.9.30-1 0 0.00 accelerated BLAST compatible local sequence aligner orphan
diamond-aligner-git 0.9.27.r1.g58ee82e-1 0 0.00 Accelerated BLAST compatible local sequence aligner robymetallo
dloopdetector-free 1.1-1 0 0.00 Fast loop detector for sequences of monocular images. No SURF support nooblercoobler
dnaa 0.1.2-4 0 0.00 An analysis package for short reads from next-generation sequencing Synchronicity
dwgsim 0.1.12-1 0 0.00 Whole genome read simulator for Next-Generation Sequencing data orphan
dwgsim-git r159.39a1bbb-3 0 0.00 Whole genome read simulator for Next-Generation Sequencing data orphan
edcount 1.2.0-1 0 0.00 Estimate distinct count of values from standard input. Provides a very fast way to perform unique count estimates on the command line ragouel
emacs-evil-escape-git r117.f4e9116-1 0 0.00 Customizable key sequence to escape from insert state and everything else in Emacs. orphan
emacs-guide-key 1.2.5-1 0 0.00 Guide following keys to an input key sequence automatically and dynamically in Emacs. orphan

324 packages found. Page 1 of 7.

1 2 3 4 5 6 ... Next › Last »