|
r-prebs
|
1.42.0-1 |
0 |
0.00
|
Probe region expression estimation for RNA-seq data for improved microarray comparability |
BioArchLinuxBot
|
2023-10-28 14:16 (UTC) |
|
r-pram
|
1.18.0-1 |
0 |
0.00
|
Pooling RNA-seq datasets for assembling transcript models |
BioArchLinuxBot
|
2023-10-27 09:17 (UTC) |
|
r-pqsfinder
|
2.18.0-1 |
0 |
0.00
|
Identification of potential quadruplex forming sequences |
BioArchLinuxBot
|
2023-10-26 02:48 (UTC) |
|
r-ppcseq
|
1.10.0-5 |
0 |
0.00
|
Probabilistic Outlier Identification for RNA Sequencing Generalized Linear Models |
BioArchLinuxBot
|
2024-02-08 12:42 (UTC) |
|
r-powsc
|
1.10.0-1 |
0 |
0.00
|
Simulation, power evaluation, and sample size recommendation for single cell RNA-seq |
BioArchLinuxBot
|
2023-10-27 09:58 (UTC) |
|
r-polyester
|
1.38.0-1 |
0 |
0.00
|
Simulate RNA-seq reads |
BioArchLinuxBot
|
2023-10-26 06:32 (UTC) |
|
r-poiclaclu
|
1.0.2.1-10 |
0 |
0.00
|
Classification and Clustering of Sequencing Data Based on a Poisson Model |
BioArchLinuxBot
|
2024-04-24 20:41 (UTC) |
|
r-pinfsc50
|
1.3.0-2 |
0 |
0.00
|
Sequence ('FASTA'), Annotation ('GFF') and Variants ('VCF') for 17 Samples of 'P. Infestans" and 1 'P. Mirabilis' |
BioArchLinuxBot
|
2024-03-16 18:08 (UTC) |
|
r-pics
|
2.46.0-1 |
0 |
0.00
|
Probabilistic inference of ChIP-seq |
BioArchLinuxBot
|
2023-10-27 07:34 (UTC) |
|
r-phyloseq
|
1.46.0-1 |
0 |
0.00
|
Handling and analysis of high-throughput microbiome census data |
BioArchLinuxBot
|
2023-10-28 12:14 (UTC) |
|
r-phipdata
|
1.10.0-1 |
0 |
0.00
|
Container for PhIP-Seq Experiments |
BioArchLinuxBot
|
2023-11-04 18:01 (UTC) |
|
r-phantasuslite
|
1.0.0-1 |
0 |
0.00
|
Loading and annotation RNA-Seq counts matrices |
pekkarr
|
2023-11-28 11:41 (UTC) |
|
r-periodicdna
|
1.12.0-1 |
0 |
0.00
|
Set of tools to identify periodic occurrences of k-mers in DNA sequences |
BioArchLinuxBot
|
2023-10-27 11:22 (UTC) |
|
r-peptides
|
2.4.6-1 |
0 |
0.00
|
Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences |
BioArchLinuxBot
|
2023-12-14 00:13 (UTC) |
|
r-peco
|
1.14.0-1 |
0 |
0.00
|
A Supervised Approach for **P**r**e**dicting **c**ell Cycle Pr**o**gression using scRNA-seq data |
BioArchLinuxBot
|
2023-10-30 18:40 (UTC) |
|
r-pcaexplorer
|
2.28.0-1 |
0 |
0.00
|
Interactive Visualization of RNA-seq Data Using a Principal Components Approach |
BioArchLinuxBot
|
2023-10-28 15:02 (UTC) |
|
r-pasilla
|
1.30.0-1 |
0 |
0.00
|
Data package with per-exon and per-gene read counts of RNA-seq samples of Pasilla knock-down by Brooks et al., Genome Research 2011. |
BioArchLinuxBot
|
2023-10-27 10:01 (UTC) |
|
r-partcnv
|
1.0.0-1 |
0 |
0.00
|
Infer locally aneuploid cells using single cell RNA-seq data |
pekkarr
|
2023-11-27 11:50 (UTC) |
|
r-outrider
|
1.20.0-1 |
0 |
0.00
|
OUTRIDER - OUTlier in RNA-Seq fInDER |
BioArchLinuxBot
|
2023-10-27 10:33 (UTC) |
|
r-oscope
|
1.32.0-1 |
0 |
0.00
|
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq |
BioArchLinuxBot
|
2023-10-26 06:47 (UTC) |
|
r-orfhunter
|
1.10.0-1 |
0 |
0.00
|
Predict open reading frames in nucleotide sequences |
BioArchLinuxBot
|
2023-10-27 11:35 (UTC) |
|
r-ompbam
|
1.6.0-1 |
0 |
0.00
|
C++ Library for OpenMP-based multi-threaded sequential profiling of Binary Alignment Map (BAM) files |
pekkarr
|
2023-12-06 10:33 (UTC) |
|
r-odseq
|
1.30.0-1 |
0 |
0.00
|
Outlier detection in multiple sequence alignments |
BioArchLinuxBot
|
2023-10-26 03:39 (UTC) |
|
r-normr
|
1.28.0-1 |
0 |
0.00
|
Normalization and difference calling in ChIP-seq data |
BioArchLinuxBot
|
2023-10-27 09:23 (UTC) |
|
r-noiseq
|
2.46.0-2 |
0 |
0.00
|
Exploratory analysis and differential expression for RNA-seq data |
BioArchLinuxBot
|
2024-04-18 18:26 (UTC) |
|
r-newwave
|
1.12.0-1 |
0 |
0.00
|
Negative binomial model for scRNA-seq |
BioArchLinuxBot
|
2023-10-30 18:23 (UTC) |
|
r-netsmooth
|
1.22.0-1 |
0 |
0.00
|
Network smoothing for scRNAseq |
BioArchLinuxBot
|
2023-10-30 19:04 (UTC) |
|
r-nbpseq
|
0.3.1-1 |
0 |
0.00
|
Negative Binomial Models for RNA-Sequencing Data |
BioArchLinuxBot
|
2022-06-09 13:04 (UTC) |
|
r-nbamseq
|
1.18.0-1 |
0 |
0.00
|
Negative Binomial Additive Model for RNA-Seq Data |
BioArchLinuxBot
|
2023-11-03 00:29 (UTC) |
|
r-nanomethviz
|
2.8.1-1 |
0 |
0.00
|
Visualise methlation data from Oxford Nanopore sequencing |
BioArchLinuxBot
|
2023-11-10 00:08 (UTC) |
|
r-nadfinder
|
1.26.0-1 |
0 |
0.00
|
Call wide peaks for sequencing data |
BioArchLinuxBot
|
2023-10-27 15:47 (UTC) |
|
r-muscle
|
3.44.0-1 |
0 |
0.00
|
Multiple Sequence Alignment with MUSCLE |
BioArchLinuxBot
|
2023-10-26 03:04 (UTC) |
|
r-muscat
|
1.16.0-1 |
0 |
0.00
|
Multi-sample multi-group scRNA-seq data analysis tools |
BioArchLinuxBot
|
2023-10-30 18:41 (UTC) |
|
r-multirnaflow
|
1.0.0-1 |
0 |
0.00
|
An R package for analysing RNA-seq raw counts with several biological conditions and different time points |
pekkarr
|
2023-11-27 11:28 (UTC) |
|
r-msgbsr
|
1.26.0-1 |
0 |
0.00
|
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functions |
BioArchLinuxBot
|
2023-10-27 15:27 (UTC) |
|
r-msar
|
0.6.0-2 |
0 |
0.00
|
Multiple Sequence Alignment for R Shiny |
BioArchLinuxBot
|
2022-06-06 08:17 (UTC) |
|
r-msa2dist
|
1.6.0-1 |
0 |
0.00
|
MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis |
pekkarr
|
2023-10-26 02:35 (UTC) |
|
r-msa
|
1.34.0-1 |
0 |
0.00
|
Multiple Sequence Alignment |
BioArchLinuxBot
|
2023-10-26 02:45 (UTC) |
|
r-mpfe
|
1.38.0-2 |
0 |
0.00
|
Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data |
BioArchLinuxBot
|
2024-03-30 00:03 (UTC) |
|
r-motifstack
|
1.46.0-1 |
0 |
0.00
|
Plot stacked logos for single or multiple DNA, RNA and amino acid sequence |
BioArchLinuxBot
|
2023-10-27 13:18 (UTC) |
|
r-motifdb
|
1.44.0-1 |
0 |
0.00
|
An Annotated Collection of Protein-DNA Binding Sequence Motifs |
BioArchLinuxBot
|
2023-10-27 09:12 (UTC) |
|
r-motifcounter
|
1.26.0-1 |
0 |
0.00
|
R package for analysing TFBSs in DNA sequences |
BioArchLinuxBot
|
2023-10-26 03:00 (UTC) |
|
r-motif2site
|
1.6.0-1 |
0 |
0.00
|
Detect binding sites from motifs and ChIP-seq experiments, and compare binding sites across conditions |
pekkarr
|
2023-12-11 11:35 (UTC) |
|
r-mosaics
|
2.40.0-1 |
0 |
0.00
|
MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq) |
BioArchLinuxBot
|
2023-10-27 07:27 (UTC) |
|
r-monocle
|
2.30.1-2 |
0 |
0.00
|
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq |
BioArchLinuxBot
|
2024-04-09 12:16 (UTC) |
|
r-modstrings
|
1.18.0-1 |
0 |
0.00
|
Working with modified nucleotide sequences |
BioArchLinuxBot
|
2023-10-26 02:38 (UTC) |
|
r-moanin
|
1.10.0-1 |
0 |
0.00
|
An R Package for Time Course RNASeq Data Analysis |
BioArchLinuxBot
|
2023-10-27 07:08 (UTC) |
|
r-mmdiff2
|
1.30.0-1 |
0 |
0.00
|
Statistical Testing for ChIP-Seq data sets |
BioArchLinuxBot
|
2023-10-27 11:14 (UTC) |
|
r-mmappr2
|
1.10.0-4 |
0 |
0.00
|
Mutation Mapping Analysis Pipeline for Pooled RNA-Seq |
BioArchLinuxBot
|
2022-11-04 06:36 (UTC) |
|
r-mlseq
|
2.20.0-1 |
0 |
0.00
|
Machine Learning Interface for RNA-Seq Data |
BioArchLinuxBot
|
2023-10-28 14:26 (UTC) |