32 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer Last Updated
snp 8-3 8 1.00 Wrap any shell command in a snapper pre-post snapshot, e.g. snp pacman -Syu. fire100265 2022-04-15 11:46 (UTC)
bitsnpicas 2.0.2-1 1 0.03 Bitmap and Emoji Font Creation and Conversion Tools. jgmdev 2023-10-29 22:35 (UTC)
bitsnpicas-git 2.0.2.r325.7700757-1 1 0.02 Kreative BitsNPicas, with MapEdit and KeyEdit, in the latest snapshot version diaowinner 2024-03-03 03:03 (UTC)
snpeff 5.2-2 0 0.00 Genetic variant annotation and effect prediction toolbox. doi:10.4161/fly.19695 kbipinkumar 2023-10-03 12:02 (UTC)
r-xtrasnplocs.hsapiens.dbsnp144.grch37 0.99.12-4 0 0.00 Extra SNP locations for Homo sapiens (dbSNP Build 144) BioArchLinuxBot 2022-06-06 19:00 (UTC)
r-trio 3.40.0-1 0 0.00 Testing of SNPs and SNP Interactions in Case-Parent Trio Studies BioArchLinuxBot 2023-10-26 01:45 (UTC)
r-traser 1.32.0-1 0 0.00 GWAS trait-associated SNP enrichment analyses in genomic intervals BioArchLinuxBot 2023-10-27 11:33 (UTC)
r-snpstats 1.52.0-2 0 0.00 SnpMatrix and XSnpMatrix classes and methods BioArchLinuxBot 2024-04-08 18:04 (UTC)
r-snprelate 1.36.1-1 0 0.00 Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data BioArchLinuxBot 2024-02-28 00:02 (UTC)
r-snplocs.hsapiens.dbsnp150.grch38 0.99.20-3 0 0.00 SNP locations for Homo sapiens (dbSNP Build 150) BioArchLinuxBot 2022-06-06 15:35 (UTC)
r-snplocs.hsapiens.dbsnp144.grch37 0.99.20-4 0 0.00 SNP locations for Homo sapiens (dbSNP Build 144) BioArchLinuxBot 2022-06-06 15:35 (UTC)
r-snphood 1.32.0-1 0 0.00 SNPhood: Investigate, quantify and visualise the epigenomic neighbourhood of SNPs using NGS data BioArchLinuxBot 2023-11-03 00:32 (UTC)
r-snpediar 1.28.0-1 0 0.00 Query data from SNPedia BioArchLinuxBot 2023-10-25 19:49 (UTC)
r-sift.hsapiens.dbsnp137 1.0.0-3 0 0.00 PROVEAN/SIFT Predictions for Homo sapiens dbSNP build 137 BioArchLinuxBot 2022-06-06 15:03 (UTC)
r-scrime 1.3.5-10 0 0.00 Analysis of High-Dimensional Categorical Data Such as SNP Data BioArchLinuxBot 2024-03-15 14:11 (UTC)
r-rsnps 0.6.0-4 0 0.00 Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web BioArchLinuxBot 2023-10-27 03:36 (UTC)
r-rlmm 1.64.0-2 0 0.00 A Genotype Calling Algorithm for Affymetrix SNP Arrays BioArchLinuxBot 2024-04-05 18:05 (UTC)
r-polyphen.hsapiens.dbsnp131 1.0.2-3 0 0.00 PolyPhen Predictions for Homo sapiens dbSNP build 131 BioArchLinuxBot 2022-06-06 10:47 (UTC)
r-mbqtl 1.2.0-4 0 0.00 A package for SNP-Taxa mGWAS analysis pekkarr 2024-04-25 19:08 (UTC)
r-logicfs 2.22.0-2 0 0.00 Identification of SNP Interactions BioArchLinuxBot 2024-04-14 12:04 (UTC)
r-inpower 1.38.0-2 0 0.00 An R package for computing the number of susceptibility SNPs BioArchLinuxBot 2024-04-07 18:04 (UTC)
r-icsnp 1.1.2-1 0 0.00 Tools for Multivariate Nonparametrics BioArchLinuxBot 2023-09-18 18:24 (UTC)
r-epistasisga 1.4.0-3 0 0.00 An R package to identify multi-snp effects in nuclear family studies using the GADGETS method pekkarr 2024-04-26 00:53 (UTC)
r-demuxsnp 1.0.0-1 0 0.00 scRNAseq demultiplexing using cell hashing and SNPs pekkarr 2023-11-23 12:28 (UTC)
r-crlmm 1.60.0-1 0 0.00 Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays BioArchLinuxBot 2023-10-27 08:48 (UTC)
r-cpvsnp 1.34.0-1 0 0.00 Gene set analysis methods for SNP association p-values that lie in genes in given gene sets BioArchLinuxBot 2023-10-27 10:52 (UTC)
r-chopsticks 1.68.0-2 0 0.00 The 'snp.matrix' and 'X.snp.matrix' Classes BioArchLinuxBot 2024-03-18 18:04 (UTC)
r-bsgenome 1.70.2-1 0 0.00 Software infrastructure for efficient representation of full genomes and their SNPs BioArchLinuxBot 2024-02-10 00:02 (UTC)
r-beadarraysnp 1.68.0-1 0 0.00 Normalization and reporting of Illumina SNP bead arrays BioArchLinuxBot 2023-10-25 23:18 (UTC)
r-atsnp 1.18.0-1 0 0.00 Affinity test for identifying regulatory SNPs BioArchLinuxBot 2023-10-27 14:33 (UTC)
r-asgsca 1.36.0-2 0 0.00 Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models BioArchLinuxBot 2024-03-17 12:03 (UTC)
python-geneimpacts 0.3.7-1 0 0.00 normalize effects from variant annotation tools (snpEff, VEP) orphan 2022-02-07 16:12 (UTC)

32 packages found. Page 1 of 1.