|
r-nnsvg
|
1.6.4-1 |
0 |
0.00
|
Scalable identification of spatially variable genes in spatially-resolved transcriptomics data |
pekkarr
|
2024-03-20 18:14 (UTC) |
|
r-proloc
|
1.42.0-1 |
0 |
0.00
|
A unifying bioinformatics framework for spatial proteomics |
BioArchLinuxBot
|
2023-10-28 15:07 (UTC) |
|
r-prolocgui
|
2.12.0-1 |
0 |
0.00
|
Interactive visualisation of spatial proteomics data |
BioArchLinuxBot
|
2023-10-28 15:27 (UTC) |
|
r-regionalst
|
1.0.1-1 |
0 |
0.00
|
Investigating regions of interest and performing cross-regional analysis with spatial transcriptomics data |
pekkarr
|
2024-04-12 17:46 (UTC) |
|
r-retrofit
|
1.2.0-4 |
0 |
0.00
|
Reference-free deconvolution of cell mixtures in spatial transcriptomics |
pekkarr
|
2024-04-25 07:58 (UTC) |
|
r-rgdal
|
1.6.7-1 |
0 |
0.00
|
Bindings for the 'Geospatial' Data Abstraction Library |
carlosal1015
|
2023-06-01 03:49 (UTC) |
|
r-santa
|
2.38.0-1 |
0 |
0.00
|
Spatial Analysis of Network Associations |
BioArchLinuxBot
|
2023-10-26 00:01 (UTC) |
|
r-scdesign3
|
1.0.1-1 |
0 |
0.00
|
A unified framework of realistic in silico data generation and statistical model inference for single-cell and spatial omics |
pekkarr
|
2024-01-16 00:03 (UTC) |
|
r-scfeatures
|
1.3.2-1 |
0 |
0.00
|
Multi-view representations of single-cell and spatial data for disease outcome prediction |
pekkarr
|
2024-01-20 12:17 (UTC) |
|
r-scider
|
1.0.0-1 |
0 |
0.00
|
Spatial cell-type inter-correlation by density in R |
pekkarr
|
2023-11-28 19:18 (UTC) |
|
r-sfedata
|
1.4.0-3 |
0 |
0.00
|
Example SpatialFeatureExperiment datasets |
pekkarr
|
2024-04-26 16:55 (UTC) |
|
r-spamm
|
4.4.16-1 |
0 |
0.00
|
Mixed-Effect Models, with or without Spatial Random Effects |
pekkarr
|
2024-03-23 11:26 (UTC) |
|
r-spaniel
|
1.16.0-1 |
0 |
0.00
|
Spatial Transcriptomics Analysis |
BioArchLinuxBot
|
2023-10-31 18:54 (UTC) |
|
r-spasim
|
1.4.0-1 |
0 |
0.00
|
Spatial point data simulator for tissue images |
pekkarr
|
2023-12-05 14:09 (UTC) |
|
r-spatialcpie
|
1.18.0-1 |
0 |
0.00
|
Cluster analysis of Spatial Transcriptomics data |
BioArchLinuxBot
|
2023-10-28 12:18 (UTC) |
|
r-spatialde
|
1.8.1-1 |
0 |
0.00
|
R wrapper for SpatialDE |
BioArchLinuxBot
|
2024-02-13 00:08 (UTC) |
|
r-spatialdecon
|
1.12.3-1 |
0 |
0.00
|
Deconvolution of mixed cells from spatial and/or bulk gene expression data |
BioArchLinuxBot
|
2024-01-24 00:09 (UTC) |
|
r-spatialexperiment
|
1.12.0-1 |
0 |
0.00
|
S4 Class for Spatial Experiments handling |
BioArchLinuxBot
|
2023-10-27 07:44 (UTC) |
|
r-spatialextremes
|
2.1.0-5 |
0 |
0.00
|
Modelling Spatial Extremes |
BioArchLinuxBot
|
2022-06-06 15:50 (UTC) |
|
r-spatialfeatureexperiment
|
1.4.0-1 |
0 |
0.00
|
Integrating SpatialExperiment with Simple Features in sf |
pekkarr
|
2023-12-05 14:12 (UTC) |
|
r-spatialheatmap
|
2.8.5-1 |
0 |
0.00
|
Creating spatial heatmaps from R and Shiny |
BioArchLinuxBot
|
2024-02-18 12:06 (UTC) |
|
r-spatiallibd
|
1.14.1-2 |
0 |
0.00
|
an R/Bioconductor package to visualize spatially-resolved transcriptomics data |
pekkarr
|
2023-12-15 12:55 (UTC) |
|
r-spatialtools
|
1.0.5-1 |
0 |
0.00
|
Tools for Spatial Data Analysis |
BioArchLinuxBot
|
2023-07-19 00:03 (UTC) |
|
r-spatstat
|
3.0.8-1 |
0 |
0.00
|
Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests |
BioArchLinuxBot
|
2024-03-26 18:08 (UTC) |
|
r-spbayes
|
0.4.7-1 |
0 |
0.00
|
Univariate and Multivariate Spatial-Temporal Modeling |
BioArchLinuxBot
|
2023-12-12 00:04 (UTC) |
|
r-spdata
|
2.3.0-3 |
0 |
0.00
|
Datasets for Spatial Analysis |
pekkarr
|
2024-04-25 00:25 (UTC) |
|
r-spdep
|
1.3.3-1 |
0 |
0.00
|
Spatial Dependence: Weighting Schemes, Statistics |
pekkarr
|
2024-02-07 18:05 (UTC) |
|
r-spiat
|
1.4.2-1 |
0 |
0.00
|
Spatial Image Analysis of Tissues |
pekkarr
|
2024-03-22 18:04 (UTC) |
|
r-spicyr
|
1.14.3-1 |
0 |
0.00
|
Spatial analysis of in situ cytometry data |
BioArchLinuxBot
|
2024-01-11 06:02 (UTC) |
|
r-splancs
|
2.01.44-2 |
0 |
0.00
|
Spatial and Space-Time Point Pattern Analysis |
BioArchLinuxBot
|
2024-04-08 18:06 (UTC) |
|
r-spotclean
|
1.4.1-1 |
0 |
0.00
|
SpotClean adjusts for spot swapping in spatial transcriptomics data |
pekkarr
|
2023-12-06 11:53 (UTC) |
|
r-spotlight
|
1.6.7-1 |
0 |
0.00
|
`SPOTlight`: Spatial Transcriptomics Deconvolution |
pekkarr
|
2024-04-13 10:30 (UTC) |
|
r-spqn
|
1.14.0-1 |
0 |
0.00
|
Spatial quantile normalization |
BioArchLinuxBot
|
2023-10-27 06:50 (UTC) |
|
r-standr
|
1.6.0-1 |
0 |
0.00
|
Spatial transcriptome analyses of Nanostring's DSP data in R |
pekkarr
|
2023-12-13 11:38 (UTC) |
|
r-statial
|
1.4.5-1 |
0 |
0.00
|
A package to identify changes in cell state relative to spatial associations |
pekkarr
|
2023-12-06 12:20 (UTC) |
|
r-stdeconvolve
|
1.6.0-3 |
0 |
0.00
|
Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data |
pekkarr
|
2024-04-25 19:22 (UTC) |
|
r-stexampledata
|
1.10.1-1 |
0 |
0.00
|
Collection of spatially-resolved transcriptomics datasets in SpatialExperiment Bioconductor format |
pekkarr
|
2024-03-20 00:06 (UTC) |
|
r-stjoincount
|
1.4.0-3 |
0 |
0.00
|
Join count statistic for quantifying spatial correlation between clusters |
pekkarr
|
2023-12-15 13:06 (UTC) |
|
r-subcellbarcode
|
1.18.0-1 |
0 |
0.00
|
SubCellBarCode: Integrated workflow for robust mapping and visualizing whole human spatial proteome |
BioArchLinuxBot
|
2023-10-26 04:31 (UTC) |
|
r-tenxvisiumdata
|
1.10.0-1 |
0 |
0.00
|
Visium spatial gene expression data by 10X Genomics |
pekkarr
|
2024-04-13 10:29 (UTC) |
|
r-terra
|
1.7.71-1 |
0 |
0.00
|
Spatial Data Analysis |
peippo
|
2024-02-01 15:45 (UTC) |
|
r-tloh
|
1.10.0-1 |
0 |
0.00
|
Assessment of evidence for LOH in spatial transcriptomics pre-processed data using Bayes factor calculations |
BioArchLinuxBot
|
2023-10-28 14:48 (UTC) |
|
r-voyager
|
1.4.0-1 |
0 |
0.00
|
From geospatial to spatial omics |
pekkarr
|
2023-12-06 17:07 (UTC) |
|
s2geometry-git
|
r233-1 |
1 |
0.00
|
Computational geometry and spatial indexing on the sphere |
akhenakh
|
2020-12-03 19:28 (UTC) |
|
spatialite-gui
|
2.1.0-2 |
9 |
0.00
|
spatialite-gui is an open source Graphical User Interface (GUI) tool supporting SpatiaLite. |
geosam
|
2021-08-01 00:42 (UTC) |
|
spatialite-gui-devel
|
r230.0942f54-1 |
0 |
0.00
|
spatialite-gui is an open source Graphical User Interface (GUI) tool supporting SpatiaLite. Development version |
geosam
|
2019-10-11 22:15 (UTC) |
|
spatialite-tools
|
5.1.0-1 |
7 |
0.00
|
Set of CLI tools for spatialite |
alhirzel
|
2023-09-06 13:06 (UTC) |
|
ssr-git
|
0.4.2.r78.g989568c-7 |
3 |
0.00
|
A tool for real-time spatial audio reproduction providing a variety of rendering algorithms, e.g. Wave Field Synthesis, Higher-Order Ambisonics and binaural techniques. |
dvzrv
|
2018-03-11 12:23 (UTC) |
|
ssr-osc-git
|
0.4.2.r498.g31dd677-1 |
0 |
0.00
|
A tool for real-time spatial audio reproduction (with OSC interface) |
dvzrv
|
2019-02-24 14:47 (UTC) |
|
virtualpg-devel
|
r15.5e528ed-1 |
0 |
0.00
|
VirtualPG is a loadable dynamic extension to both SQLite and SpatiaLite. |
geosam
|
2019-10-11 22:12 (UTC) |