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r-stexampledata
|
1.10.1-1 |
0 |
0.00
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Collection of spatially-resolved transcriptomics datasets in SpatialExperiment Bioconductor format |
pekkarr
|
2024-03-20 00:06 (UTC) |
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r-stepnorm
|
1.74.0-1 |
0 |
0.00
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Stepwise normalization functions for cDNA microarrays |
BioArchLinuxBot
|
2023-10-26 07:03 (UTC) |
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r-stemhypoxia
|
1.38.0-2 |
0 |
0.00
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Differentiation of Human Embryonic Stem Cells under Hypoxia gene expression dataset by Prado-Lopez et al. (2010) |
BioArchLinuxBot
|
2024-03-08 18:05 (UTC) |
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r-stdeconvolve
|
1.6.0-1 |
0 |
0.00
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Reference-free Cell-Type Deconvolution of Multi-Cellular Spatially Resolved Transcriptomics Data |
pekkarr
|
2023-12-13 11:40 (UTC) |
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r-stattarget
|
1.32.0-1 |
0 |
0.00
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Statistical Analysis of Molecular Profiles |
BioArchLinuxBot
|
2023-10-25 22:08 (UTC) |
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r-statip
|
0.2.3-7 |
0 |
0.00
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Statistical Functions for Probability Distributions and Regression |
BioArchLinuxBot
|
2024-04-09 12:14 (UTC) |
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r-statial
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1.4.5-1 |
0 |
0.00
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A package to identify changes in cell state relative to spatial associations |
pekkarr
|
2023-12-06 12:20 (UTC) |
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r-stategra
|
1.38.0-1 |
0 |
0.00
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Classes and methods for multi-omics data integration |
BioArchLinuxBot
|
2023-10-26 06:52 (UTC) |
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r-startupmsg
|
0.9.6.1-1 |
0 |
0.00
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Utilities for Start-Up Messages |
BioArchLinuxBot
|
2024-02-12 18:09 (UTC) |
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r-stars
|
0.6.5-1 |
0 |
0.00
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Spatiotemporal Arrays, Raster and Vector Data Cubes |
BioArchLinuxBot
|
2024-04-04 19:00 (UTC) |
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r-stargazer
|
5.2.3-1 |
0 |
0.00
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Well-Formatted Regression and Summary Statistics Tables |
pekkarr
|
2023-09-18 14:22 (UTC) |
|
r-standr
|
1.6.0-1 |
0 |
0.00
|
Spatial transcriptome analyses of Nanostring's DSP data in R |
pekkarr
|
2023-12-13 11:38 (UTC) |
|
r-stabs
|
0.6.4-9 |
0 |
0.00
|
Stability Selection with Error Control |
BioArchLinuxBot
|
2024-03-10 02:48 (UTC) |
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r-stabledist
|
0.7.1-9 |
0 |
0.00
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Stable Distribution Functions |
BioArchLinuxBot
|
2023-12-30 00:07 (UTC) |
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r-stable
|
1.1.6-8 |
0 |
0.00
|
Probability Functions and Generalized Regression Models for Stable Distributions |
BioArchLinuxBot
|
2024-04-14 12:20 (UTC) |
|
r-ssnappy
|
1.6.2-1 |
0 |
0.00
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Single Sample directioNAl Pathway Perturbation analYsis |
pekkarr
|
2024-04-06 06:03 (UTC) |
|
r-ssize
|
1.76.0-1 |
0 |
0.00
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Estimate Microarray Sample Size |
BioArchLinuxBot
|
2023-10-25 19:51 (UTC) |
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r-sseq
|
1.40.0-1 |
0 |
0.00
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Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size |
BioArchLinuxBot
|
2023-10-25 19:50 (UTC) |
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r-sscore
|
1.72.0-2 |
0 |
0.00
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S-Score Algorithm for Affymetrix Oligonucleotide Microarrays |
BioArchLinuxBot
|
2024-02-15 18:02 (UTC) |
|
r-ssc
|
2.1.0-1 |
0 |
0.00
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Semi-Supervised Classification Methods |
pekkarr
|
2023-10-20 20:56 (UTC) |
|
r-srnadiff
|
1.22.2-1 |
0 |
0.00
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Finding differentially expressed unannotated genomic regions from RNA-seq data |
BioArchLinuxBot
|
2024-03-12 00:11 (UTC) |
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r-srgnet
|
1.16.0-4 |
0 |
0.00
|
An R package for studying synergistic response to gene mutations from transcriptomics data |
BioArchLinuxBot
|
2022-11-26 16:01 (UTC) |
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r-sradb
|
1.64.0-1 |
0 |
0.00
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A compilation of metadata from NCBI SRA and tools |
BioArchLinuxBot
|
2023-10-26 07:07 (UTC) |
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r-squash
|
1.0.9-7 |
0 |
0.00
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Color-Based Plots for Multivariate Visualization |
BioArchLinuxBot
|
2023-12-27 00:08 (UTC) |
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r-squarem
|
2021.1-12 |
0 |
0.00
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Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms |
BioArchLinuxBot
|
2023-12-21 00:02 (UTC) |
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r-sqldataframe
|
1.16.1-1 |
0 |
0.00
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Representation of SQL database in DataFrame metaphor |
BioArchLinuxBot
|
2024-02-13 00:03 (UTC) |
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r-spsutil
|
0.2.2-4 |
0 |
0.00
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'systemPipeShiny' Utility Functions |
BioArchLinuxBot
|
2022-06-06 16:36 (UTC) |
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r-spsimseq
|
1.12.0-1 |
0 |
0.00
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Semi-parametric simulation tool for bulk and single-cell RNA sequencing data |
BioArchLinuxBot
|
2023-10-28 14:51 (UTC) |
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r-spqn
|
1.14.0-1 |
0 |
0.00
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Spatial quantile normalization |
BioArchLinuxBot
|
2023-10-27 06:50 (UTC) |
|
r-spotlight
|
1.6.7-1 |
0 |
0.00
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`SPOTlight`: Spatial Transcriptomics Deconvolution |
pekkarr
|
2024-04-13 10:30 (UTC) |
|
r-spotclean
|
1.4.1-1 |
0 |
0.00
|
SpotClean adjusts for spot swapping in spatial transcriptomics data |
pekkarr
|
2023-12-06 11:53 (UTC) |
|
r-sponge
|
1.24.0-1 |
0 |
0.00
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Sparse Partial Correlations On Gene Expression |
BioArchLinuxBot
|
2024-04-13 18:20 (UTC) |
|
r-splots
|
1.68.0-4 |
0 |
0.00
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Visualization of high-throughput assays in microtitre plate or slide format |
BioArchLinuxBot
|
2024-04-07 12:04 (UTC) |
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r-splitstackshape
|
1.4.8-7 |
0 |
0.00
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Stack and Reshape Datasets After Splitting Concatenated Values |
BioArchLinuxBot
|
2024-04-07 12:07 (UTC) |
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r-splinetimer
|
1.30.0-1 |
0 |
0.00
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Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction |
BioArchLinuxBot
|
2023-10-26 06:42 (UTC) |
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r-splines2
|
0.5.1-1 |
0 |
0.00
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Regression Spline Functions and Classes |
BioArchLinuxBot
|
2023-08-20 00:02 (UTC) |
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r-splicewiz
|
1.4.1-1 |
0 |
0.00
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Easy, optimized, and accurate alternative splicing analysis in R |
pekkarr
|
2024-01-07 12:07 (UTC) |
|
r-splatter
|
1.26.0-1 |
0 |
0.00
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Simple Simulation of Single-cell RNA Sequencing Data |
BioArchLinuxBot
|
2023-10-27 09:52 (UTC) |
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r-splancs
|
2.01.44-2 |
0 |
0.00
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Spatial and Space-Time Point Pattern Analysis |
BioArchLinuxBot
|
2024-04-08 18:06 (UTC) |
|
r-spiky
|
1.8.0-1 |
0 |
0.00
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Spike-in calibration for cell-free MeDIP |
BioArchLinuxBot
|
2023-10-27 11:15 (UTC) |
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r-spidermir
|
1.32.0-1 |
0 |
0.00
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SpidermiR: An R/Bioconductor package for integrative network analysis with miRNA data |
BioArchLinuxBot
|
2023-10-26 05:01 (UTC) |
|
r-spicyr
|
1.14.3-1 |
0 |
0.00
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Spatial analysis of in situ cytometry data |
BioArchLinuxBot
|
2024-01-11 06:02 (UTC) |
|
r-spiat
|
1.4.2-1 |
0 |
0.00
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Spatial Image Analysis of Tissues |
pekkarr
|
2024-03-22 18:04 (UTC) |
|
r-spia
|
2.54.0-1 |
0 |
0.00
|
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations |
BioArchLinuxBot
|
2023-10-26 01:50 (UTC) |
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r-spem
|
1.42.0-1 |
0 |
0.00
|
S-system parameter estimation method |
BioArchLinuxBot
|
2023-10-25 23:08 (UTC) |
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r-speedglm
|
0.3.5-2 |
0 |
0.00
|
Fitting Linear and Generalized Linear Models to Large Data Sets |
BioArchLinuxBot
|
2023-06-19 18:01 (UTC) |
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r-spectraltad
|
1.18.0-1 |
0 |
0.00
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SpectralTAD: Hierarchical TAD detection using spectral clustering |
BioArchLinuxBot
|
2023-10-27 10:04 (UTC) |
|
r-specond
|
1.56.0-1 |
0 |
0.00
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Condition specific detection from expression data |
BioArchLinuxBot
|
2023-10-25 23:22 (UTC) |
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r-specl
|
1.36.0-1 |
0 |
0.00
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specL - Prepare Peptide Spectrum Matches for Use in Targeted Proteomics |
BioArchLinuxBot
|
2023-10-25 20:39 (UTC) |
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r-speckle
|
1.2.0-1 |
0 |
0.00
|
Statistical methods for analysing single cell RNA-seq data |
pekkarr
|
2023-11-14 17:41 (UTC) |