91229 packages found. Page 1133 of 1825.

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Name Version Votes Popularity? Description Maintainer Last Updated
r-rarity 1.3.8-2 0 0.00 Calculation of Rarity Indices for Species and Assemblages of Species malacology 2024-03-06 00:01 (UTC)
r-rcpphungarian 0.3-2 0 0.00 Solves Minimum Cost Bipartite Matching Problems malacology 2024-02-23 00:02 (UTC)
r-rogue 2.1.6-2 0 0.00 Identify Rogue Taxa in Sets of Phylogenetic Trees malacology 2024-02-23 00:05 (UTC)
r-strap 1.6.0-2 0 0.00 Stratigraphic Tree Analysis for Palaeontology malacology 2024-02-23 00:03 (UTC)
r-tbrdist 1.0.2-2 0 0.00 Rearrangement Distances Between Unrooted Phylogenetic Trees malacology 2024-02-23 00:05 (UTC)
r-ternary 2.3.1-2 0 0.00 Create Ternary and Holdridge Plots malacology 2024-02-23 00:04 (UTC)
r-treedist 2.7.0-2 0 0.00 Calculate and Map Distances Between Phylogenetic Trees malacology 2024-02-23 00:03 (UTC)
rasp 4.2-1 0 0.00 Reconstruct Ancestral State in Phylogenies is a tool for inferring ancestral state malacology 2021-05-10 08:12 (UTC)
raxml-light 1.0.9-1 0 0.00 A tool for computing terabyte phylogenies https://doi.org/10.1093/bioinformatics/bts309 malacology 2022-08-29 01:53 (UTC)
raxml-ng 1.2.1-1 1 0.00 A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305 malacology 2023-12-22 18:11 (UTC)
raxml-ng-mpi 1.2.1-1 0 0.00 A phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. https://doi.org/10.1093/bioinformatics/btz305 malacology 2023-12-22 18:14 (UTC)
raxmlgui 2.0.10-2 1 0.00 A new user-friendly program integrating RAxML-NG and ModelTest-NG for cutting-edge phylogenetic analysis. https://doi.org/10.1111/2041-210X.13512 malacology 2023-12-05 00:03 (UTC)
revbayes 1.2.2-1 1 0.00 Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language https://doi.org/10.1093/sysbio/syw021 malacology 2023-06-10 05:44 (UTC)
revbayes-mpi 1.2.2-1 1 0.00 Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language https://doi.org/10.1093/sysbio/syw021 malacology 2023-06-10 05:23 (UTC)
rockpix-ap6255 1.0-1 0 0.00 WiFi & BT Firmware patch for ROCK PI X malacology 2024-03-17 18:19 (UTC)
seaview 5.0.5-8 11 0.00 GUI for multiple sequence alignment and molecular phylogeny. https://doi.org/10.1093/molbev/msp259 malacology 2022-09-03 01:59 (UTC)
seqan3 3.3.0-1 0 0.00 The modern C++ library for sequence analysis https://doi.org/10.1016/j.jbiotec.2017.07.017 malacology 2023-10-06 15:14 (UTC)
seqcombgo 0.0.1-1 0 0.00 Sequence Combination tool written in Golang malacology 2022-01-18 17:47 (UTC)
seqcombgo-bin 0.0.1-1 0 0.00 Sequence Combination tool written in Golang malacology 2022-01-18 17:46 (UTC)
seqcombgo-git r61.7abdfcb-1 0 0.00 Sequence Combination tool written in Golang malacology 2022-01-18 17:43 (UTC)
seqdistk 1.0-2 0 0.00 tools to calculate the distance among sequence malacology 2023-04-04 19:09 (UTC)
seqlib 1.2.0-12 0 0.00 C++ htslib/bwa-mem/fermi interface for interrogating sequence data malacology 2024-01-23 00:11 (UTC)
sequencematrix 1.9-6 1 0.00 Taxonomy-aware DNA sequence processing toolkit malacology 2022-12-04 01:53 (UTC)
sfa-spa 0.2.1-0 0 0.00 A short peptide assembler for metagenomic data https://doi.org/10.1093/nar/gkt118 malacology 2023-03-04 19:13 (UTC)
slf-wt 2014.03.10-0 0 0.00 A prototype program implementing character state reconstructions under non-lineal functions of the state changes (Pee-Wee with SeLF-WeighTed) https://doi.org/10.1006/clad.1997.0043 malacology 2023-07-29 17:57 (UTC)
smartdenovo 2021.02.24-1 0 0.00 About Ultra-fast de novo assembler using long noisy reads malacology 2023-02-09 11:45 (UTC)
soapnuke 2.1.8-1 0 0.00 A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files http://dx.doi.org/10.5524/100361 malacology 2023-10-13 19:08 (UTC)
spa 2014.03.10-0 0 0.00 Sankoff Parsimony Analysis https://doi.org/10.1006/clad.1998.0068 malacology 2023-07-29 17:57 (UTC)
speciesidentifier 1.9-6 1 0.00 Taxonomy-aware DNA sequence processing toolkit malacology 2022-12-04 01:53 (UTC)
spread 1.0.7-6 0 0.00 a user-friendly application to analyze and visualize phylogeographic reconstructions resulting from Bayesian inference of spatio-temporal diffusion. https://doi.org/10.1093/bioinformatics/btr481 malacology 2023-05-06 15:46 (UTC)
spread3 1:0.9.5-1 0 0.00 a user-friendly application to analyze and visualize pathogen phylodynamic reconstructions resulting from Bayesian inference of sequence and trait evolutionary processes. https://doi.org/10.1093/molbev/msw082 malacology 2023-04-28 05:27 (UTC)
stringtie 2.2.1-6 0 0.00 A fast and highly efficient assembler of RNA-Seq alignments into potential transcripts malacology 2023-06-11 15:42 (UTC)
tabixpp 1.1.2-1 0 0.00 C++ wrapper to tabix indexer malacology 2023-01-19 18:01 (UTC)
tempest-bin 1.5.3-1 0 0.00 a tool for investigating the temporal signal and 'clocklikeness' of molecular phylogenies malacology 2021-05-27 05:31 (UTC)
tiger1 1.02-1 0 0.00 Identifying rapidly-evolving characters in evolutionary data malacology 2021-06-20 13:43 (UTC)
tn93 .1.0.13.actual-1 0 0.00 TN93 fast distance calculator malacology 2024-01-08 18:02 (UTC)
tnt-bio 1.6-1 1 0.00 Tree analysis using New Technology. https://doi.org/10.1111/cla.12160 malacology 2023-04-24 06:47 (UTC)
tnt-extra 1.6-1 1 0.00 Tree analysis using New Technology. https://doi.org/10.1111/cla.12160 malacology 2023-04-24 06:47 (UTC)
tnt-gui 1.6-1 1 0.00 Tree analysis using New Technology. https://doi.org/10.1111/cla.12160 malacology 2023-04-24 06:47 (UTC)
tnt-mpi 1.6-1 1 0.00 Tree analysis using New Technology. https://doi.org/10.1111/cla.12160 malacology 2023-04-24 06:47 (UTC)
tophat 2.1.2-3 10 0.00 fast splice junction mapper for RNA-Seq reads malacology 2023-06-01 21:28 (UTC)
tpsdig 2021.6.3-1 0 0.00 Digitize landmarks & outlines from image files, scanner, or video malacology 2023-01-03 00:01 (UTC)
tpsrelw 1.74-1 0 0.00 Relative warps analysis malacology 2022-03-25 02:21 (UTC)
tpsutil 2023.03.04-1 0 0.00 tps file utility program malacology 2023-03-05 06:04 (UTC)
tracer-bin 1.7.2-1 1 0.00 Posterior summarisation in Bayesian phylogenetics malacology 2022-10-14 07:13 (UTC)
tracy-bin 0.6.1-1 0 0.00 Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files malacology 2021-11-19 02:04 (UTC)
tree-puzzle 5.3.rc16-1 0 0.00 Maximum likelihood analysis for nucleotide, amino acid, and two-state data malacology 2024-02-04 16:40 (UTC)
treemap 3b1243-7 0 0.00 a tool for analysing relationships between evolutionary histories of ecologically linked species malacology 2024-01-22 06:01 (UTC)
treeviewx 0.5.0-1 0 0.00 Program to display phylogenetic trees malacology 2023-02-05 09:33 (UTC)
trinityrnaseq 2.15.1-1 0 0.00 Transcriptome assembler for RNA-seq reads https://doi.org/10.1038%2Fnbt.1883 malacology 2024-02-15 19:27 (UTC)

91229 packages found. Page 1133 of 1825.

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