91296 packages found. Page 1133 of 1826.

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Name Version Votes Popularity? Description Maintainer Last Updated
mrbayes-mpi 3.2.7-8 2 0.00 MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. https://doi.org/10.1093/sysbio/sys029 malacology 2022-08-02 12:01 (UTC)
mrbayes-mpi-beagle 3.2.7-15 0 0.00 MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. https://doi.org/10.1093/sysbio/sys029 malacology 2022-08-02 18:13 (UTC)
mrbayes-mpi-desktop 1.0-1 1 0.00 Desktop File For MrBayes MPI malacology 2021-05-07 06:07 (UTC)
mrmodeltest 2.4-1 0 0.00 C program for selecting DNA substitution models using PAUP* malacology 2021-12-22 20:53 (UTC)
nona 2014.03.10-5 1 0.00 NONA: a bastard son of Pee-Wee. Phylogenetic Analysis Software malacology 2023-07-21 07:08 (UTC)
nona-win 2014.03.10-0 0 0.00 a bastard son of Pee-Wee malacology 2023-07-29 17:57 (UTC)
notekit 0.2.0-1 2 0.00 A GTK3 hierarchical markdown notetaking application with tablet support. malacology 2022-12-18 14:18 (UTC)
notekit-git r207.18b708d-1 4 0.00 A GTK3 hierarchical markdown notetaking application with tablet support. malacology 2022-06-16 12:05 (UTC)
nudelta 0.7.4-1 0 0.00 Open source NuPhy Console alternative malacology 2023-10-11 09:38 (UTC)
oblong 2014.03.10-1 0 0.00 A program to analyse phylogenomic data sets with millions of characters, requiring negligible amounts of RAM. https://doi.org/10.1111/cla.12056 malacology 2022-08-29 19:55 (UTC)
open-delta 1:1.0.3_beta-1 1 0.00 DEscription Language of TAxonomy malacology 2023-04-25 19:25 (UTC)
paml 4.10.7-1 0 0.00 Phylogenetic analysis by maximum likelihood. https://doi.org/10.1093/molbev/msm088 malacology 2023-06-29 22:48 (UTC)
pamlx 1.3.1-4 0 0.00 A Graphical User Interface for PAML https://doi.org/10.1093/molbev/mst179 malacology 2024-02-05 17:10 (UTC)
pars-win-extra 2014.03.10-0 0 0.00 Parsimony programs extra software from Pablo A. Goloboff malacology 2023-07-29 17:57 (UTC)
parsimonator 1.0.2-2 0 0.00 A fast open-source parsimony program malacology 2022-08-29 02:06 (UTC)
paup-desktop 1.0-1 1 0.00 Desktop File For PAUP* malacology 2021-05-06 08:47 (UTC)
paup-gui 4.0a-1 0 0.00 Phylogenetic Analysis Using PAUP malacology 2021-05-11 17:00 (UTC)
pee-wee 2014.03.10-0 0 0.00 (P)arsimony and (I)mplied (WE)ights malacology 2023-07-29 17:57 (UTC)
phast-win 2014.03.10-0 0 0.00 PHylogenetic Analysis for Sankoff Transformations https://doi.org/10.1006/clad.1998.0068 malacology 2023-07-29 17:57 (UTC)
phyde 0.9971-2 0 0.00 a system-independent editor for DNA and amino acid sequence alignments, designed to assist anybody interested in phylogenetic or other comparative analyses of sequence data malacology 2022-08-28 10:34 (UTC)
phylobayes 4.1e-1 1 0.00 phylogenetic reconstruction using infinite mixtures malacology 2021-05-15 13:14 (UTC)
phylobayes-mpi 1.9-1 1 0.00 phylogenetic reconstruction using infinite mixtures. https://doi.org/10.1093/molbev/msh112 malacology 2022-10-16 08:44 (UTC)
phylogeography 1.10.4-0 1 0.00 BEAST PhyloGeography https://doi.org/10.1186/1471-2148-7-214 malacology 2023-05-07 11:21 (UTC)
phylonet 3.8.4-3 0 0.00 suite of software tools for reconstructing/analyzing phylogenetic networks in the presence of reticulate evolutionary events. https://doi.org/10.1093/sysbio/syy015 malacology 2022-12-01 18:01 (UTC)
phylonet-hmm 0.1-1 0 0.00 An HMM-based comparative genomic framework for detecting introgression in eukaryotes malacology 2021-05-27 06:12 (UTC)
phylosuite 1.2.3-2 0 0.00 an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. https://doi.org/10.1111/1755-0998.13096 malacology 2023-04-04 19:09 (UTC)
pibuss 1.10.4-0 1 0.00 a BEAST/BEAGLE utility for sequence simulation, which provides an easy to use interface that allows flexible and extensible phylogenetic data fabrication. https://doi.org/10.1186/1471-2105-15-133 malacology 2023-05-07 11:21 (UTC)
picard-tools 3.1.1-1 8 0.00 set of tools for working with next generation sequencing data in the BAM format malacology 2023-11-15 00:03 (UTC)
pid_children-git r10.749d59c-1 0 0.00 A simple program outputs descendant process ids for each pid given on the command line malacology 2021-07-12 17:44 (UTC)
pleroma 2.6.2-1 0 0.00 A microblogging server software that can federate other servers that support ActivityPub malacology 2024-02-22 14:16 (UTC)
pleroma-git 2.5.50.2023.02.09-1 0 0.00 A microblogging server software that can federate other servers that support ActivityPub malacology 2023-02-11 14:41 (UTC)
plume 0.7.2-2 0 0.00 Federated blogging application malacology 2023-02-10 08:18 (UTC)
plume-postgres 0.7.2-1 0 0.00 Federated blogging application malacology 2022-05-25 00:54 (UTC)
plume-sqlite 0.7.2-1 0 0.00 Federated blogging application malacology 2022-05-25 01:00 (UTC)
popart 2019.07.15-6 0 0.00 Full-feature software for haplotype network reconstruction. https://doi.org/10.1111/2041-210X.12410 malacology 2023-07-02 18:33 (UTC)
preseq 3.2.0-3 0 0.00 A tool for predicting and estimating the complexity of a genomic sequencing library, equivalent to predicting and estimating the number of redundant reads from a given sequencing depth. malacology 2023-07-26 18:17 (UTC)
pvm 3.4.6-10 12 0.00 Parallel Virtual Machine malacology 2022-10-20 12:01 (UTC)
python-dendropy 4.6.1-1 0 0.00 A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters. malacology 2023-06-09 06:02 (UTC)
python-ete3 3.1.3-1 1 0.00 A Python Environment for (phylogenetic) Tree Exploration malacology 2023-05-02 12:02 (UTC)
r-ecoindr 2.0-2 0 0.00 Ecological Indicators malacology 2024-03-06 00:05 (UTC)
r-fd 1.0.12.3-2 0 0.00 Measuring Functional Diversity (FD) from Multiple Traits, and Other Tools for Functional Ecology malacology 2024-03-06 00:05 (UTC)
r-genepop 1.2.2-1 0 0.00 Population Genetic Data Analysis Using Genepop malacology 2024-03-05 00:01 (UTC)
r-geoscale 2.0.1-2 0 0.00 Geological Time Scale Plotting malacology 2024-02-23 00:01 (UTC)
r-protoclust 1.6.4-2 0 0.00 Hierarchical Clustering with Prototypes malacology 2024-02-23 00:01 (UTC)
r-quartet 1.2.6-2 0 0.00 Comparison of Phylogenetic Trees Using Quartet and Split Measures malacology 2024-02-23 00:06 (UTC)
r-rarity 1.3.8-2 0 0.00 Calculation of Rarity Indices for Species and Assemblages of Species malacology 2024-03-06 00:01 (UTC)
r-rcpphungarian 0.3-2 0 0.00 Solves Minimum Cost Bipartite Matching Problems malacology 2024-02-23 00:02 (UTC)
r-rogue 2.1.6-2 0 0.00 Identify Rogue Taxa in Sets of Phylogenetic Trees malacology 2024-02-23 00:05 (UTC)
r-strap 1.6.0-2 0 0.00 Stratigraphic Tree Analysis for Palaeontology malacology 2024-02-23 00:03 (UTC)
r-tbrdist 1.0.2-2 0 0.00 Rearrangement Distances Between Unrooted Phylogenetic Trees malacology 2024-02-23 00:05 (UTC)

91296 packages found. Page 1133 of 1826.

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