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Package Details: artemis 17.0.1-1
| Git Clone URL: | https://aur.archlinux.org/artemis.git (read-only) |
|---|---|
| Package Base: | artemis |
| Description: | A genome viewer and annotation tool that visualizes biological sequence features |
| Upstream URL: | https://www.sanger.ac.uk/science/tools/artemis |
| Licenses: | |
| Submitter: | clintval |
| Maintainer: | None |
| Last Packager: | clintval |
| Votes: | 1 |
| Popularity: | 0.064373 |
| First Submitted: | 2017-11-01 21:38 |
| Last Updated: | 2018-06-10 21:02 |
Dependencies (1)
- java-runtime>=1.6 (server-jre, jdk5, zulu-jdk, jdk9-openj9-bin, jdk7, jre7, jre6, tuxjdk, jre7-openjdk-infinality, java-8-openjdk-shenandoah, jre8-openjdk-infinality, java-gcj-compat, jdk10-openjdk-openj9-bin, jre8-openjdk-shenandoah, jdk9, jre9, jdk8-j9-bin, jre8-openjdk-jetbrains, jdk-devel, jdk8-openj9-bin, jdk11-openj9-bin, jdk7-j9-bin, jdk7r1-j9-bin, jdk8-arm64, jdk10, jdk-arm, graal-bin, java-openjdk-ea-bin, jre10, jdk8, jdk6, jre8, intellij-jdk, jdk-dcevm, jre, jre-openjdk, jre10-openjdk, jre7-openjdk, jre8-openjdk)
Latest Comments
Vrob commented on 2018-12-02 12:44
I have two issues with this package, one of which I was able to resolve:
It seems like aur/log4j is a dependency, as I was getting java errors about org/apache/log4j/AppenderSkeleton not being found. They disappeared after installing the package.
Now, when I try to run either art or act I get the following error message.
$ art Starting Artemis with arguments: -mx2g -ms100m -noverify -Djdbc.drivers=org.postgresql.Driver -Dartemis.environment=UNIX
Error: Could not find or load main class uk.ac.sanger.artemis.components.ArtemisMain Caused by: java.lang.ClassNotFoundException: uk.ac.sanger.artemis.components.ArtemisMain
Any ideas what I'm missing here?
maheha commented on 2018-02-27 09:25
@clintcal Thanks!
clintval commented on 2018-02-26 18:31
Hi @maheha, looks like they changed the upstream URL. I just fixed.
maheha commented on 2018-02-26 12:13
Hi
I get this error while making package: curl: (78) RETR response: 550 ==> ERROR: Failure while downloading ftp://ftp.sanger.ac.uk/pub/resources/software/artemis/v16/v16.0.18.tar.gz Aborting...
thanks for the package.