Package Details: bcftools 1.23.1-1

Git Clone URL: https://aur.archlinux.org/bcftools.git (read-only, click to copy)
Package Base: bcftools
Description: A program for variant calling and manipulating files in the Variant Call Format (VCF) and its binary counterpart BCF
Upstream URL: https://samtools.github.io/bcftools
Licenses: GPL-3.0-only
Submitter: sbarbi
Maintainer: meanjollies
Last Packager: meanjollies
Votes: 8
Popularity: 0.000000
First Submitted: 2012-10-02 15:52 (UTC)
Last Updated: 2026-03-19 03:18 (UTC)

Latest Comments

wookietreiber commented on 2016-03-05 10:54 (UTC)

Turns out there was already a fix. Updated to include it.

lzlarryli commented on 2016-03-03 23:08 (UTC) (edited on 2016-03-03 23:12 (UTC) by lzlarryli)

Hi, I had a build error: peakfit.c: In function ‘peakfit_run’: peakfit.c:553:41: error: ‘gsl_multifit_fdfsolver {aka struct <anonymous>}’ has no member named ‘J’ gsl_multifit_gradient(solver->J, solver->f, grad); ^ Makefile:95: recipe for target 'peakfit.o' failed make: *** [peakfit.o] Error 1 It seems some gsl related problem. However, I downloaded bcftools from the official site and that compiled corrected without any problem.

wookietreiber commented on 2015-02-06 10:54 (UTC)

Now the plugins are also included at /usr/lib/bcftools. This directory is set in /etc/profile.d/bcftools.sh via BCFTOOLS_PLUGINS environment variable.