Package Details: bowtie 1.1.1-1

Package Base: bowtie
Description: Bowtie is an alignment tool for short nucleotide sequences against long templates
Upstream URL: http://bowtie-bio.sf.net
Category: science
Licenses: PerlArtistic
Submitter: Athemis
Maintainer: Athemis
Last Packager: Athemis
Votes: 5
First Submitted: 2011-12-20 15:12
Last Updated: 2015-01-16 15:48

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Required by (1)

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Latest Comments

Comment by sauliusl

2015-01-16 11:43

PKGBUILD for 1.1.1:
http://pastebin.com/CUNi5u9s

Comment by vejnar

2014-11-12 00:46

Updated for 1.1.1

http://pastebin.com/M2ptymtb

Comment by balwierz

2014-11-05 16:20

version 1.1.1 is out

Comment by wookietreiber

2014-07-24 09:17

Please also add the scipts directory to $pkgdir/usr/bin!

Comment by Athemis

2013-06-26 14:31

Thanks! It's sufficient to just use 'uname -m' instead. I added a patch in the updated package.

Anonymous comment

2013-06-24 18:14

Makefile uses uname -p to look for x86_64 architecture on line 110, but that and the -i flag kinda got dropped:
https://bbs.archlinux.org/viewtopic.php?id=141548

I changed line 110 to the following, which works for me:
ifneq (0, $(shell grep flags /proc/cpuinfo | grep lm -c))

Hope this is the right place to put this.

Comment by Athemis

2012-07-31 22:51

Now correctly builds with gcc-4.7

Comment by Athemis

2012-05-15 09:33

Updated

Comment by qifei9

2012-05-15 08:18

0.12.8 release - 5/6/12