Package Details: bwa-mem2 2.3-1

Git Clone URL: https://aur.archlinux.org/bwa-mem2.git (read-only, click to copy)
Package Base: bwa-mem2
Description: The next version of Burrows-Wheeler Aligner MEM algorithm
Upstream URL: https://github.com/bwa-mem2/bwa-mem2
Licenses: MIT
Submitter: vejnar
Maintainer: vejnar
Last Packager: vejnar
Votes: 1
Popularity: 0.000000
First Submitted: 2023-05-17 01:02 (UTC)
Last Updated: 2026-01-20 23:37 (UTC)

Latest Comments

a821 commented on 2024-09-30 12:30 (UTC)

I had to add the patch below to make it build. There are missing headers

diff --git a/ext/safestringlib/safeclib/abort_handler_s.c b/ext/safestringlib/safeclib/abort_handler_s.c
index d956bfd..387f27e 100644
--- a/ext/safestringlib/safeclib/abort_handler_s.c
+++ b/ext/safestringlib/safeclib/abort_handler_s.c
@@ -30,6 +30,7 @@
  */

 #include "safeclib_private.h"
+#include <stdlib.h>

 /**
  * NAME
diff --git a/ext/safestringlib/safeclib/strcasecmp_s.c b/ext/safestringlib/safeclib/strcasecmp_s.c
index 7293cef..99dafe7 100644
--- a/ext/safestringlib/safeclib/strcasecmp_s.c
+++ b/ext/safestringlib/safeclib/strcasecmp_s.c
@@ -32,7 +32,7 @@
 #include "safeclib_private.h"
 #include "safe_str_constraint.h"
 #include "safe_str_lib.h"
-
+#include <ctype.h>

 /**
  * NAME
diff --git a/ext/safestringlib/safeclib/strcasestr_s.c b/ext/safestringlib/safeclib/strcasestr_s.c
index 52c9d2a..087a4f6 100644
--- a/ext/safestringlib/safeclib/strcasestr_s.c
+++ b/ext/safestringlib/safeclib/strcasestr_s.c
@@ -32,7 +32,7 @@
 #include "safeclib_private.h"
 #include "safe_str_constraint.h"
 #include "safe_str_lib.h"
-
+#include <ctype.h>

 /**
  * NAME