Package Details: cellprofiler-git 2.1.2.SNAPSHOT.r367.g7f8ba1d-1

Git Clone URL: https://aur.archlinux.org/cellprofiler-git.git (read-only)
Package Base: cellprofiler-git
Description: Analysis software for cellular images
Upstream URL: http://www.cellprofiler.org/
Licenses: GPL
Provides: cellprofiler
Submitter: mschu
Maintainer: radioxoma
Last Packager: radioxoma
Votes: 1
Popularity: 0.000000
First Submitted: 2012-09-03 16:25
Last Updated: 2015-07-29 18:02

Required by (1)

Sources (3)

Latest Comments

Malambo commented on 2016-01-15 13:24

Seems that still working! thanks!

mschu commented on 2014-07-25 12:11

Updated, thanks.

alex.forencich commented on 2014-07-24 08:24

Seems like there is something wrong with the setup.py part. I managed to get this working; here is what you need to do:

delete the entire prepare() section

delete everything in build() except for the first and last line (cd and the call to CellProfiler.py)

add

export LD_LIBRARY_PATH=$JAVA_HOME/jre/lib/amd64:$JAVA_HOME/jre/lib/amd64/server

to cellprofiler.sh

run makepkg -g to regenerate the hashes, paste them in. Then build and install.

shugoshin commented on 2014-05-13 21:14

I am also getting the same error:
distutils.errors.DistutilsError: Setup script exited with error: This distribution is only supported on MacOSX

any help please?

alex.forencich commented on 2014-04-04 00:52

I'm getting the following error when I try to install this:

distutils.errors.DistutilsError: Setup script exited with error: This distribution is only supported on MacOSX

mschu commented on 2013-10-26 13:09

Updated, thanks for the patches!

anntzer commented on 2013-10-25 20:51

Updated PKGBUILD (depend on python2-imaging instead of python-imaging, and call cython2 as suggested by pallegro) and cp.patch (recent versions of CellProfiler solved the python/python2 issue): http://pastebin.com/qMeTYQ4r and http://pastebin.com/ghXYWv6p

anntzer commented on 2013-10-20 23:07

This should depend on python2-imaging.

pallegro commented on 2013-09-10 21:20

FYI, I needed to move 'import cellprofiler.utilities.version' up out of the if statement in setup.py and run 'cython2 cellprofiler/utilities/javabridge.pyx' before 'python2 setup.py build'