Hi, is anyone else having trouble using and/or installing it? Something related with mmdb2
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Package Details: coot 0.8.9.2-1
Git Clone URL: | https://aur.archlinux.org/coot.git (read-only, click to copy) |
---|---|
Package Base: | coot |
Description: | Crystallographic Object-Oriented Toolkit for model building, completion and validation |
Upstream URL: | http://lmb.bioch.ox.ac.uk/coot/ |
Keywords: | science |
Licenses: | GPL |
Replaces: | coot-data |
Submitter: | Athemis |
Maintainer: | Athemis |
Last Packager: | Athemis |
Votes: | 2 |
Popularity: | 0.000000 |
First Submitted: | 2016-01-12 02:53 (UTC) |
Last Updated: | 2020-04-15 09:45 (UTC) |
Dependencies (27)
- bc (bc-ghAUR)
- cairo (cairo-glesv2-binAUR, cairo-glesv3-binAUR, cairo-gitAUR)
- curl (curl-quiche-gitAUR, curl-http3-ngtcp2AUR, curl-gitAUR)
- freeglut (freeglut-x11-gitAUR, freeglut-wayland-gitAUR)
- goocanvas1AUR
- gsl (gsl-gitAUR)
- gtk2 (gtk2-patched-filechooser-icon-viewAUR, gtk2-maemoAUR)
- gtkglareaAUR
- gtkglext (gtkglext-pangoxAUR)
- guile1.8AUR
- guile1.8-gtkAUR
- guile1.8-guiAUR
- guile1.8-libAUR
- imlib
- libccp4AUR (libccp4-bzrAUR)
- libclipperAUR
- libgl (nvidia-340xx-utilsAUR, amdgpu-pro-oglpAUR, libglvnd)
- libgnomecanvasAUR
- libssmAUR
- mmdb2AUR
- Show 7 more dependencies...
Required by (0)
Sources (14)
- coot-0.8.9.2.tar.gz
- coot-configure.ac.patch
- coot-dynarama.patch
- coot-guile.patch
- coot-lbg.patch
- coot-libguile.patch
- coot-lidia.patch
- coot-makefile.patch
- coot-pyrogen.patch
- coot-python.patch
- coot-utils.patch
- coot.in
- https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/reference-structures.tar.gz
- https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/dependencies/refmac-monomer-library.tar.gz
Livia commented on 2022-12-20 03:59 (UTC)
archiebald commented on 2020-04-16 01:52 (UTC)
0.8.9.2 works great. Thanks! Looking forward to 0.9.
Athemis commented on 2020-04-15 09:12 (UTC) (edited on 2020-04-15 09:41 (UTC) by Athemis)
I'm currently struggling to get version 0.9 to compile. I'll push 0.8.9.2 up soon (which is the version currently shipped with the CCP4 suite). This will as usual need an old version of python2-rdkit (<=2017_09_3).
archiebald commented on 2019-09-17 01:54 (UTC)
Thanks, works great!
Athemis commented on 2019-09-16 10:58 (UTC)
@archiebald: A new binary package is now available. Have fun ;)
archiebald commented on 2019-09-14 14:57 (UTC)
Hi Athemis - My coot-0.8.9.1-3 installed from your binaries on repo home_Athemis_coot_Arch recently stopped working. I see there has been an update to coot-0.8.9.1-4. Would you be able to update your binary packages in your repo as well? I see some of them have recently been updated (e.g. mmdb2). Your help is much appreciated!
Athemis commented on 2019-09-13 11:48 (UTC) (edited on 2019-09-13 11:48 (UTC) by Athemis)
@ywen232625: rdkit-python2 has been fixed in the latest AUR version (depends on python2-cairo now). However, coot will most likely fail to build against this version. You'll need to edit the version in the python2-rdkit PKGBUILD to read "2017_09_03" and then either regenerate the source hashes (install pacman-contrib package and run "updpkgsums") or ignore them (makepkg --skipinteg).
ywen232625 commented on 2019-08-06 16:12 (UTC)
Hi, I have some trouble when trying to install rdkit-python2, it shows that I need to install "python2-cairocffi" in order to install rdkit-python2. And I found that there is no way to install python2-cairocffi. Can you help me out? Thanks in advance
archiebald commented on 2018-10-14 02:45 (UTC) (edited on 2018-10-15 03:29 (UTC) by archiebald)
[SOLVED] Hardware stereo is working now. Had to turn of compositor in KDE Plasma.
@Athemis: Thanks for making your binaries available. Things work fine on my system except for stereo. Can anyone confirm that hardware stereo is actually working with this build?
nmruser commented on 2018-07-31 20:56 (UTC)
@Athemis Thanks, works like charm!
Pinned Comments
Athemis commented on 2020-04-15 09:12 (UTC) (edited on 2020-04-15 09:41 (UTC) by Athemis)
I'm currently struggling to get version 0.9 to compile. I'll push 0.8.9.2 up soon (which is the version currently shipped with the CCP4 suite). This will as usual need an old version of python2-rdkit (<=2017_09_3).
Athemis commented on 2018-07-10 19:44 (UTC)
Binary packages of coot and its dependencies can be found in my repo. Add these lines to your /etc/pacman.conf:
And install coot via
pacman -Syu & pacman -S coot