Package Details: coot

Git Clone URL: (read-only)
Package Base: coot
Description: Crystallographic Object-Oriented Toolkit for model building, completion and validation
Upstream URL:
Keywords: science
Licenses: GPL
Replaces: coot-data
Submitter: Athemis
Maintainer: Athemis
Last Packager: Athemis
Votes: 1
Popularity: 0.000000
First Submitted: 2016-01-12 02:53
Last Updated: 2019-09-13 12:31

Required by (0)

Sources (14)

Pinned Comments

Athemis commented on 2018-07-10 19:44

Binary packages of coot and its dependencies can be found in my repo. Add these lines to your /etc/pacman.conf:

SigLevel = Never
Server =$arch

And install coot via pacman -Syu & pacman -S coot

Latest Comments

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Athemis commented on 2018-07-04 22:17

@nmruser: I'll look into that. We might have to wait for Paul to fix that upstream. Meanwhile, you may work around this by sticking to an older version of rdkit-python2

nmruser commented on 2018-07-04 18:06

Can you update the package for rdkit-python2_2018xx? Cannot compile with the latest rdkit-python2-2018_03_2-1.

jrdemasi commented on 2018-02-19 19:48

Worked like a charm! Thanks.

Athemis commented on 2018-02-15 12:25

Btw, I added a package that builds libccp4-7.0 from the CCP4 VCS (they don't provide tarballs for the recent version). I don't know if there are any benefits from using that. Probably not, since official Coot binaries seem to be still built against libccp4-6.4. Anyhow, you may give it a try and replace libccp4 with libccp4-bzr.

Athemis commented on 2018-02-15 09:56

Good catch. I updated the pyrogen patch to apply to the new release, but missed pushing the updated patch to git ;-)

jrdemasi commented on 2018-02-14 21:56

Actually, as it turns out the patching fails altogether.

jrdemasi commented on 2018-02-14 21:53

coot-pyrogen.patch is currently failing validity checks. Could you update the pkgbuild to reflect the proper shasum?


jrdemasi commented on 2017-06-16 05:25

Thanks so much for taking care of this!

Athemis commented on 2017-06-15 21:12

I finally managed to build the current version of coot including its enhanced ligand (EL) mode. If you get any errors while compiling which refer to missing libtool files (*.la), please remove your old installation of coot + its dependencies (offenders are libccp4, libssm, mmdb2 and clipper) and rebuild these packages from scratch.

wooke98 commented on 2016-02-18 18:12

Thank you for the work! It works like a charm! Although it doesn't work with a bumblebee system.
One minor error, the conflicts should be an array in PKGBUILD.