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Package Details: coot 1.1.10-3

Package Actions

Git Clone URL:	https://aur.archlinux.org/coot.git (read-only, click to copy)
Package Base:	coot
Description:	Crystallographic Object-Oriented Toolkit for model building, completion and validation
Upstream URL:	https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
Keywords:	science
Licenses:	GPL
Replaces:	coot-data
Submitter:	Athemis
Maintainer:	hgonomeg
Last Packager:	hgonomeg
Votes:	2
Popularity:	0.000000
First Submitted:	2016-01-12 02:53 (UTC)
Last Updated:	2024-09-20 17:40 (UTC)

Dependencies (23)

boost-libs
cairo (cairo-git^AUR)
curl (curl-quiche-git^AUR, curl-http3-ngtcp2^AUR, curl-git^AUR, curl-c-ares^AUR)
fftw2-float^AUR
glib2 (glib2-git^AUR, glib2-selinux^AUR, glib2-patched-thumbnailer^AUR)
glm (glm-git^AUR)
gsl (gsl-git^AUR)
gtk4 (gtk4-customizable^AUR, gtk4-paper-plane^AUR, gtk4-git^AUR)
guile (guile-git^AUR)
libccp4^AUR (libccp4-bzr^AUR)
libclipper^AUR
libgl (nvidia-340xx-utils^AUR, libglvnd-git^AUR, amdgpu-pro-oglp^AUR, amdgpu-pro-oglp-legacy^AUR, libglvnd)
libssm^AUR
mmdb2^AUR
python (python37^AUR, python311^AUR, python310^AUR)
python-gobject (python-gobject-git^AUR)
rdkit^AUR (rdkit-inchi^AUR)
sqlite (sqlite-fossil^AUR)
swig (swig-git^AUR)
zlib (zlib-ng-compat-git^AUR, zlib-git^AUR, zlib-ng-compat)
Show 3 more dependencies...

Required by (0)

Sources (4)

Pinned Comments

hgonomeg commented on 2024-09-10 21:15 (UTC)

Hi, I've adopted the package. Now it's the newest version (1.1.10).

If there's anything broken, let me know. Particularly, I don't know if Coot 1 supports Guile GUI at all.

At the time of posting this, there is just one dependency that fails to build and that is fftw2-float where openmpi is broken. The workaround is to edit the PKGBUILD and remove --with-openmpi in both places where it occurs.

All remaining dependencies should build just fine.

Athemis commented on 2018-07-10 19:44 (UTC)

Binary packages of coot and its dependencies can be found in my repo. Add these lines to your /etc/pacman.conf:

[home_Athemis_coot_Arch]
SigLevel = Never
Server = https://download.opensuse.org/repositories/home:/Athemis:/coot/Arch/$arch

And install coot via pacman -Syu & pacman -S coot

Latest Comments

« First ‹ Previous 1 2 3

jrdemasi commented on 2018-02-14 21:53 (UTC)

coot-pyrogen.patch is currently failing validity checks. Could you update the pkgbuild to reflect the proper shasum?

Thanks.

jrdemasi commented on 2017-06-16 05:25 (UTC)

Thanks so much for taking care of this!

Athemis commented on 2017-06-15 21:12 (UTC) (edited on 2017-06-16 10:28 (UTC) by Athemis)

I finally managed to build the current version of coot including its enhanced ligand (EL) mode. If you get any errors while compiling which refer to missing libtool files (*.la), please remove your old installation of coot + its dependencies (offenders are libccp4, libssm, mmdb2 and clipper) and rebuild these packages from scratch.

wooke98 commented on 2016-02-18 18:12 (UTC) (edited on 2016-02-18 18:32 (UTC) by wooke98)

Thank you for the work! It works like a charm! Although it doesn't work with a bumblebee system. One minor error, the conflicts should be an array in PKGBUILD.

« First ‹ Previous 1 2 3