Package Details: crux-toolkit-git r3376.6da2a981-1

Git Clone URL: (read-only, click to copy)
Package Base: crux-toolkit-git
Description: The Crux mass spectrometry analysis toolkit
Upstream URL:
Licenses: Apache
Conflicts: crux-toolkit-bin
Provides: crux-toolkit
Submitter: levitsky
Maintainer: levitsky
Last Packager: levitsky
Votes: 0
Popularity: 0.000000
First Submitted: 2018-03-16 22:52
Last Updated: 2021-03-26 13:33

Dependencies (5)

Required by (0)

Sources (1)

Latest Comments

Bumble commented on 2021-02-21 20:04

[ 15%] Completed 'ProteoWizard'
cd /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext && /usr/bin/cmake -E make_directory /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext/CMakeFiles
cd /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext && /usr/bin/cmake -E touch /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext/CMakeFiles/ProteoWizard-complete
cd /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext && /usr/bin/cmake -E touch /home/sfo/builds/crux-toolkit/src/crux-toolkit/ext/build/src/ProteoWizard-stamp/ProteoWizard-done
make[2]: Leaving directory '/home/sfo/builds/crux-toolkit/src/crux-toolkit'
[ 15%] Built target ProteoWizard
make[1]: Leaving directory '/home/sfo/builds/crux-toolkit/src/crux-toolkit'
make: *** [Makefile:171: all] Error 2
==> ERROR: A failure occurred in build().

Sorry it took me a bit to get back to this. The verbose output doesn't seem to inform much.

However, I did figure out that if I run makepkg twice, the second time being in the partially built directory of the first attempt, it does build. Seems a bit strange to me but I guess the end result is what matters.

I can confirm this entire process reproduced on 2 machines.

levitsky commented on 2021-02-16 18:17

Unfortunately I have no idea what goes wrong there, the excerpt has almost no information. Is it really all the context shown? Maybe try running makepkg with VERBOSE=1 then?

Bumble commented on 2021-02-16 18:12

Yeah, same things happens in a clean directory.

levitsky commented on 2021-02-14 15:07

Weird, I have successfully built that exact version, and also a later version just now. Do you get the error if you build in a clean directory?

Bumble commented on 2021-02-13 14:45

Getting a build error when updating.

[ 15%] Completed 'ProteoWizard'
[ 15%] Built target ProteoWizard
make: *** [Makefile:171: all] Error 2
==> ERROR: A failure occurred in build().
:: Packages failed to build: crux-toolkit-git-r3353.414acd52-1