Package Details: gwyddion 2.65-1

Git Clone URL: https://aur.archlinux.org/gwyddion.git (read-only, click to copy)
Package Base: gwyddion
Description: A data visualization and processing tool for scanning probe miscroscopy (SPM, i.e. AFM, STM, MFM, SNOM/NSOM, ...) and profilometry, useful also for general image and 2D data analysis
Upstream URL: http://gwyddion.net/
Licenses: GPL
Submitter: sirocco
Maintainer: sirocco
Last Packager: sirocco
Votes: 28
Popularity: 0.136368
First Submitted: 2008-11-30 12:29 (UTC)
Last Updated: 2024-02-07 23:58 (UTC)

Dependencies (18)

Required by (1)

Sources (2)

Latest Comments

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cge commented on 2022-11-23 13:58 (UTC) (edited on 2022-11-23 14:00 (UTC) by cge)

Oops, I missed the hard pygtk dependency there. I was actually going to suggest that having a gwyddion and gwyddion-python2 package would make sense, but doing it this way works as well. Thank you for keeping this as a possibility; it is really quite helpful for our research.

sirocco commented on 2022-11-23 08:38 (UTC) (edited on 2022-11-23 09:10 (UTC) by sirocco)

While pygtk is a dependency, python 2 should be installed.

For those who don't need pygwy, I created gwyddion-no-python2

cge commented on 2022-11-22 09:54 (UTC)

Yes, we do need pygwy, and the continuing possibility of using it in Arch Linux is one of the reasons I use it now; we moved away from NixOS in part because of their hostility toward it even being possible. It continues to be the best way to do batch conversions of images. I'm not sure if the developers' strong views on Gtk versions, and consequently their unwillingness to move to Python 3, has changed recently, but even if it has, pygwy would likely continue to be Python 2 only for some time.

The package should cleanly install without pygwy if the AUR python2 isn't installed, however, shouldn't it?

sirocco commented on 2022-11-22 02:22 (UTC)

Does anyone use pygwy? There is an assumption to exclude this option, as it depends on python 2.

https://archlinux.org/news/removing-python2-from-the-repositories/

Kwazar380 commented on 2022-08-17 08:38 (UTC) (edited on 2022-08-17 08:50 (UTC) by Kwazar380)

As I run Gwyddion, multiple warnings occur:


(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::fix_zero does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::calibrate does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::level does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::align_rows does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::grain_mark does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::grain_filter does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::shade does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function proc::laplace does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function graph::graph_cd does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function graph::graph_level does not exist

(gwyddion:370620): Gwyddion-Program-WARNING: Function graph::graph_export_ascii does not exist

(gwyddion:370620): GwyModule-CRITICAL: gwy_process_func_get_run_types: assertion 'func_info' failed

(gwyddion:370620): GwyApp-WARNING: Processing function <mask_remove> for data view context menu is not available.

(gwyddion:370620): GwyModule-CRITICAL: gwy_process_func_get_run_types: assertion 'func_info' failed

(gwyddion:370620): GwyApp-WARNING: Processing function <fix_zero> for data view context menu is not available.

(gwyddion:370620): GwyModule-CRITICAL: gwy_process_func_get_run_types: assertion 'func_info' failed

(gwyddion:370620): GwyApp-WARNING: Processing function <presentation_remove> for data view context menu is not available.

(gwyddion:370620): GwyModule-CRITICAL: gwy_process_func_get_run_types: assertion 'func_info' failed

(gwyddion:370620): GwyApp-WARNING: Processing function <level> for data view context menu is not available.
Memory protection violation

The last warning appears when I try to extract profiles from the data. Than the program just stops.

mmg commented on 2022-06-18 19:00 (UTC)

@cge That was the issue in my case. Thank you.

cge commented on 2022-04-12 04:26 (UTC) (edited on 2022-05-08 16:19 (UTC) by cge)

The problem with Gwyddion::dump.3pm is likely that while Gwyddion checks for pod2man, if it isn't available, it seems that it tries to use it anyway. pod2man is in /usr/bin/core_perl, so if that isn't in your path, it will cause this error.

I should clarify here that this can be a problem even if the perl package is installed, if /usr/bin/core_perl isn't in the path.

Tio commented on 2022-02-02 12:11 (UTC) (edited on 2022-02-02 12:11 (UTC) by Tio)

Yes a lot of space in tmpfs.

sirocco commented on 2022-01-30 11:15 (UTC)

free space in tmpfs